Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBE3BQ7Z3V4 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBE3BQ7Z3V4 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC18.27■□□□□ 0.52
UBE3BQ7Z3V4 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UBE3BQ7Z3V4 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBE3BQ7Z3V4 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBE3BQ7Z3V4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
UBE3BQ7Z3V4 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBE3BQ7Z3V4 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC18.27■□□□□ 0.52
UBE3BQ7Z3V4 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
UBE3BQ7Z3V4 RTN3P1-201ENST00000536295 711 ntBASIC18.27■□□□□ 0.52
UBE3BQ7Z3V4 NAT9-211ENST00000580632 799 ntTSL 3 BASIC18.27■□□□□ 0.52
UBE3BQ7Z3V4 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC18.27■□□□□ 0.52
UBE3BQ7Z3V4 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC18.27■□□□□ 0.52
UBE3BQ7Z3V4 AL353770.1-201ENST00000614915 403 ntBASIC18.27■□□□□ 0.52
UBE3BQ7Z3V4 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
UBE3BQ7Z3V4 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UBE3BQ7Z3V4 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBE3BQ7Z3V4 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBE3BQ7Z3V4 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
UBE3BQ7Z3V4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UBE3BQ7Z3V4 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC18.27■□□□□ 0.51
UBE3BQ7Z3V4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
UBE3BQ7Z3V4 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
UBE3BQ7Z3V4 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC18.27■□□□□ 0.51
UBE3BQ7Z3V4 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
UBE3BQ7Z3V4 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
UBE3BQ7Z3V4 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
UBE3BQ7Z3V4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
UBE3BQ7Z3V4 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
UBE3BQ7Z3V4 LINC01165-201ENST00000445190 1623 ntBASIC18.27■□□□□ 0.51
UBE3BQ7Z3V4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 STK26-204ENST00000481105 1835 ntTSL 2 BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 AC067930.6-201ENST00000623257 4947 ntBASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 MIR3907-201ENST00000579424 151 ntBASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 CENPX-208ENST00000584347 799 ntTSL 2 BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 IRF3-215ENST00000596822 823 ntTSL 3 BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC18.26■□□□□ 0.51
UBE3BQ7Z3V4 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 NCR3-202ENST00000376071 541 ntTSL 5 BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 LBH-202ENST00000401506 485 ntTSL 3 BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 GAS5-209ENST00000430245 723 ntTSL 3 BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC18.25■□□□□ 0.51
UBE3BQ7Z3V4 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms