Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 CHMP1AP1-201ENST00000445563 662 ntBASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 AC009542.2-202ENST00000619004 1067 ntBASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 AC010327.5-201ENST00000586923 3061 ntBASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD3Q7Z3D4 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 AC113367.3-201ENST00000508316 1912 ntBASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 AL355994.2-201ENST00000447882 704 ntBASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 HIST2H2BB-201ENST00000449108 381 ntBASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 AC022494.1-201ENST00000466044 728 ntBASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 AL583810.1-201ENST00000553344 1045 ntBASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 DUX4L45-201ENST00000566406 1057 ntBASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 BX088702.1-201ENST00000610784 235 ntBASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 AC005786.4-201ENST00000623369 682 ntBASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 AL023775.1-201ENST00000454907 1746 ntBASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD3Q7Z3D4 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD3Q7Z3D4 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms