Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
FOXR1Q6PIV2 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 RN7SL837P-201ENST00000463010 287 ntBASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 AC022494.1-201ENST00000466044 728 ntBASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 AC123567.1-201ENST00000548294 1261 ntBASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 SRD5A3P1-201ENST00000603021 949 ntBASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 PID1-202ENST00000392054 2745 ntTSL 2 BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 VENTXP1-201ENST00000569334 2716 ntBASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
FOXR1Q6PIV2 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 AC023310.3-201ENST00000557027 670 ntBASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 AC100756.1-201ENST00000562736 682 ntBASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 AC138749.3-201ENST00000567691 622 ntBASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 AC116165.1-201ENST00000611806 668 ntBASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXR1Q6PIV2 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms