Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 AC007274.1-201ENST00000439805 662 ntBASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 Z93015.1-201ENST00000451718 390 ntBASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 RN7SL560P-201ENST00000577943 264 ntBASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 PPY2P-201ENST00000582808 702 ntBASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 LINC01230-201ENST00000625222 3017 ntBASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 AC006504.5-208ENST00000588784 2401 ntBASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.42■□□□□ 0.06
TTC39BQ5VTQ0 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 CICP4-201ENST00000447359 2812 ntBASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 AC079178.1-201ENST00000420915 656 ntBASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 AP003171.2-201ENST00000528208 925 ntBASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 AC009542.2-202ENST00000619004 1067 ntBASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 AC041040.2-201ENST00000622926 2899 ntBASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms