Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 CICP12-201ENST00000455801 843 ntBASIC12.91□□□□□ -0.34
FAM27BQ5VT28 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 AL136301.1-201ENST00000615830 422 ntBASIC12.91□□□□□ -0.34
FAM27BQ5VT28 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 KRT8P28-201ENST00000433288 1390 ntBASIC12.91□□□□□ -0.34
FAM27BQ5VT28 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 SHC1P1-201ENST00000425230 1745 ntBASIC12.91□□□□□ -0.34
FAM27BQ5VT28 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
FAM27BQ5VT28 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.9□□□□□ -0.34
FAM27BQ5VT28 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 PGF-202ENST00000405431 666 ntTSL 5 BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 MIR1909-201ENST00000411312 80 ntBASIC12.9□□□□□ -0.34
FAM27BQ5VT28 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 GRK6P1-201ENST00000400595 1711 ntBASIC12.9□□□□□ -0.34
FAM27BQ5VT28 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
FAM27BQ5VT28 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms