Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42BPAQ5VT25 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42BPAQ5VT25 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42BPAQ5VT25 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42BPAQ5VT25 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC21.57■■□□□ 1.04
CDC42BPAQ5VT25 MTHFR-210ENST00000641407 2387 ntBASIC21.57■■□□□ 1.04
CDC42BPAQ5VT25 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC21.57■■□□□ 1.04
CDC42BPAQ5VT25 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42BPAQ5VT25 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42BPAQ5VT25 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42BPAQ5VT25 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CDC42BPAQ5VT25 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC21.56■■□□□ 1.04
CDC42BPAQ5VT25 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42BPAQ5VT25 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42BPAQ5VT25 KRT18P4-201ENST00000422599 1288 ntBASIC21.56■■□□□ 1.04
CDC42BPAQ5VT25 PSAT1P2-201ENST00000426107 972 ntBASIC21.56■■□□□ 1.04
CDC42BPAQ5VT25 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC21.56■■□□□ 1.04
CDC42BPAQ5VT25 EEF1GP8-201ENST00000506566 1154 ntBASIC21.56■■□□□ 1.04
CDC42BPAQ5VT25 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC21.56■■□□□ 1.04
CDC42BPAQ5VT25 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
CDC42BPAQ5VT25 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC21.56■■□□□ 1.04
CDC42BPAQ5VT25 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42BPAQ5VT25 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CDC42BPAQ5VT25 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC21.56■■□□□ 1.04
CDC42BPAQ5VT25 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42BPAQ5VT25 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42BPAQ5VT25 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42BPAQ5VT25 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CDC42BPAQ5VT25 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42BPAQ5VT25 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42BPAQ5VT25 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42BPAQ5VT25 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 APOC1-209ENST00000592885 562 ntTSL 3 BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 AL009176.1-201ENST00000607876 650 ntBASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 SERF2-206ENST00000409291 807 ntTSL 3 BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 AC083801.1-201ENST00000491689 358 ntBASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 AC087203.1-201ENST00000532111 1181 ntBASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 AL512310.5-201ENST00000551999 515 ntBASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 AC026336.4-201ENST00000624565 1050 ntBASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
CDC42BPAQ5VT25 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC21.54■■□□□ 1.04
CDC42BPAQ5VT25 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDC42BPAQ5VT25 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC21.54■■□□□ 1.04
CDC42BPAQ5VT25 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDC42BPAQ5VT25 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CDC42BPAQ5VT25 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CDC42BPAQ5VT25 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC21.54■■□□□ 1.04
CDC42BPAQ5VT25 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDC42BPAQ5VT25 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC21.54■■□□□ 1.04
CDC42BPAQ5VT25 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDC42BPAQ5VT25 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC21.54■■□□□ 1.04
CDC42BPAQ5VT25 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CDC42BPAQ5VT25 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDC42BPAQ5VT25 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDC42BPAQ5VT25 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CDC42BPAQ5VT25 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC21.54■■□□□ 1.04
CDC42BPAQ5VT25 RN7SL147P-201ENST00000487345 298 ntBASIC21.54■■□□□ 1.04
CDC42BPAQ5VT25 AC008026.2-201ENST00000495438 348 ntBASIC21.54■■□□□ 1.04
CDC42BPAQ5VT25 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDC42BPAQ5VT25 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDC42BPAQ5VT25 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CDC42BPAQ5VT25 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC21.54■■□□□ 1.04
CDC42BPAQ5VT25 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC21.54■■□□□ 1.04
CDC42BPAQ5VT25 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CDC42BPAQ5VT25 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CDC42BPAQ5VT25 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDC42BPAQ5VT25 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDC42BPAQ5VT25 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDC42BPAQ5VT25 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CDC42BPAQ5VT25 AC138761.6-201ENST00000583997 1423 ntBASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms