Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 MIR326-201ENST00000362220 95 ntBASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 AL590640.2-201ENST00000457038 527 ntBASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 AKR7A2P1-201ENST00000460134 915 ntBASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 AC105129.2-201ENST00000559536 390 ntBASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 AC138696.2-201ENST00000607376 223 ntBASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 AC007191.1-201ENST00000623179 2995 ntBASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
HERC4Q5GLZ8 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 HINT2P1-201ENST00000419438 481 ntBASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 FAM197Y7-201ENST00000432892 766 ntBASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HERC4Q5GLZ8 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 AL136172.1-201ENST00000598590 1394 ntBASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 AL662890.1-201ENST00000396818 632 ntBASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 AL391280.1-201ENST00000506969 1062 ntBASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 ACTG1P17-201ENST00000558391 1119 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms