Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USH1GQ495M9 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
USH1GQ495M9 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
USH1GQ495M9 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USH1GQ495M9 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.9■□□□□ 0.3
USH1GQ495M9 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USH1GQ495M9 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
USH1GQ495M9 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
USH1GQ495M9 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.9■□□□□ 0.3
USH1GQ495M9 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.9■□□□□ 0.3
USH1GQ495M9 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.9■□□□□ 0.3
USH1GQ495M9 Z97180.1-201ENST00000445173 988 ntBASIC16.9■□□□□ 0.3
USH1GQ495M9 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.9■□□□□ 0.3
USH1GQ495M9 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.9■□□□□ 0.3
USH1GQ495M9 AC006122.1-201ENST00000493323 440 ntBASIC16.9■□□□□ 0.3
USH1GQ495M9 RCC2P8-201ENST00000502779 1035 ntBASIC16.9■□□□□ 0.3
USH1GQ495M9 AC009779.1-201ENST00000551138 283 ntBASIC16.9■□□□□ 0.3
USH1GQ495M9 RBM8B-201ENST00000555532 525 ntBASIC16.9■□□□□ 0.3
USH1GQ495M9 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
USH1GQ495M9 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.9■□□□□ 0.3
USH1GQ495M9 AC138627.1-207ENST00000641560 1006 ntBASIC16.9■□□□□ 0.3
USH1GQ495M9 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
USH1GQ495M9 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
USH1GQ495M9 AC144522.1-201ENST00000625111 1658 ntBASIC16.9■□□□□ 0.3
USH1GQ495M9 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
USH1GQ495M9 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USH1GQ495M9 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.9■□□□□ 0.3
USH1GQ495M9 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
USH1GQ495M9 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
USH1GQ495M9 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.9■□□□□ 0.3
USH1GQ495M9 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USH1GQ495M9 FGD5P1-202ENST00000614866 2498 ntBASIC16.9■□□□□ 0.3
USH1GQ495M9 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USH1GQ495M9 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USH1GQ495M9 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
USH1GQ495M9 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
USH1GQ495M9 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
USH1GQ495M9 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
USH1GQ495M9 AC008132.1-202ENST00000342005 1389 ntBASIC16.89■□□□□ 0.3
USH1GQ495M9 CYP4F23P-201ENST00000593402 1579 ntBASIC16.89■□□□□ 0.3
USH1GQ495M9 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.3
USH1GQ495M9 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USH1GQ495M9 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USH1GQ495M9 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
USH1GQ495M9 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
USH1GQ495M9 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USH1GQ495M9 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.89■□□□□ 0.29
USH1GQ495M9 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USH1GQ495M9 AC139712.1-201ENST00000378256 1875 ntBASIC16.89■□□□□ 0.29
USH1GQ495M9 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
USH1GQ495M9 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USH1GQ495M9 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
USH1GQ495M9 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
USH1GQ495M9 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USH1GQ495M9 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
USH1GQ495M9 AL662890.1-201ENST00000396818 632 ntBASIC16.89■□□□□ 0.29
USH1GQ495M9 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.89■□□□□ 0.29
USH1GQ495M9 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
USH1GQ495M9 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
USH1GQ495M9 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.89■□□□□ 0.29
USH1GQ495M9 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USH1GQ495M9 AL132994.2-201ENST00000603120 687 ntBASIC16.89■□□□□ 0.29
USH1GQ495M9 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USH1GQ495M9 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.89■□□□□ 0.29
USH1GQ495M9 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
USH1GQ495M9 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USH1GQ495M9 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
USH1GQ495M9 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USH1GQ495M9 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
USH1GQ495M9 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.89■□□□□ 0.29
USH1GQ495M9 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.89■□□□□ 0.29
USH1GQ495M9 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USH1GQ495M9 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
USH1GQ495M9 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.89■□□□□ 0.29
USH1GQ495M9 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
USH1GQ495M9 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USH1GQ495M9 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.89■□□□□ 0.29
USH1GQ495M9 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
USH1GQ495M9 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USH1GQ495M9 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
USH1GQ495M9 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USH1GQ495M9 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
USH1GQ495M9 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
USH1GQ495M9 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USH1GQ495M9 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.88■□□□□ 0.29
USH1GQ495M9 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
USH1GQ495M9 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
USH1GQ495M9 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USH1GQ495M9 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.88■□□□□ 0.29
USH1GQ495M9 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.88■□□□□ 0.29
USH1GQ495M9 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.88■□□□□ 0.29
USH1GQ495M9 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.88■□□□□ 0.29
USH1GQ495M9 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USH1GQ495M9 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.88■□□□□ 0.29
USH1GQ495M9 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.88■□□□□ 0.29
USH1GQ495M9 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
USH1GQ495M9 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.88■□□□□ 0.29
USH1GQ495M9 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.88■□□□□ 0.29
USH1GQ495M9 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
USH1GQ495M9 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms