Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IRX3P78415 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.26■□□□□ 0.35
IRX3P78415 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IRX3P78415 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IRX3P78415 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
IRX3P78415 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
IRX3P78415 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
IRX3P78415 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IRX3P78415 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
IRX3P78415 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IRX3P78415 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IRX3P78415 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IRX3P78415 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IRX3P78415 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IRX3P78415 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IRX3P78415 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
IRX3P78415 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
IRX3P78415 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IRX3P78415 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.25■□□□□ 0.35
IRX3P78415 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.25■□□□□ 0.35
IRX3P78415 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
IRX3P78415 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IRX3P78415 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IRX3P78415 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.25■□□□□ 0.35
IRX3P78415 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IRX3P78415 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IRX3P78415 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IRX3P78415 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IRX3P78415 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
IRX3P78415 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC17.25■□□□□ 0.35
IRX3P78415 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IRX3P78415 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
IRX3P78415 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
IRX3P78415 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
IRX3P78415 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IRX3P78415 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IRX3P78415 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IRX3P78415 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
IRX3P78415 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
IRX3P78415 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IRX3P78415 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC17.25■□□□□ 0.35
IRX3P78415 VDAC1P1-201ENST00000439229 848 ntBASIC17.25■□□□□ 0.35
IRX3P78415 KLF2P1-201ENST00000447438 1042 ntBASIC17.25■□□□□ 0.35
IRX3P78415 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC17.25■□□□□ 0.35
IRX3P78415 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC17.25■□□□□ 0.35
IRX3P78415 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
IRX3P78415 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IRX3P78415 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.25■□□□□ 0.35
IRX3P78415 AC009884.2-201ENST00000603110 324 ntBASIC17.25■□□□□ 0.35
IRX3P78415 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.25■□□□□ 0.35
IRX3P78415 AC006453.1-201ENST00000636037 1257 ntBASIC17.25■□□□□ 0.35
IRX3P78415 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.25■□□□□ 0.35
IRX3P78415 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IRX3P78415 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
IRX3P78415 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.25■□□□□ 0.35
IRX3P78415 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IRX3P78415 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IRX3P78415 MBLAC2-202ENST00000514906 1936 ntBASIC17.25■□□□□ 0.35
IRX3P78415 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.25■□□□□ 0.35
IRX3P78415 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.25■□□□□ 0.35
IRX3P78415 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.25■□□□□ 0.35
IRX3P78415 AL139385.1-201ENST00000611744 3272 ntBASIC17.25■□□□□ 0.35
IRX3P78415 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IRX3P78415 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IRX3P78415 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
IRX3P78415 AC010327.5-201ENST00000586923 3061 ntBASIC17.24■□□□□ 0.35
IRX3P78415 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IRX3P78415 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.24■□□□□ 0.35
IRX3P78415 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
IRX3P78415 AC073869.1-201ENST00000415574 2762 ntBASIC17.24■□□□□ 0.35
IRX3P78415 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
IRX3P78415 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IRX3P78415 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IRX3P78415 SBF1P1-201ENST00000444527 5631 ntBASIC17.24■□□□□ 0.35
IRX3P78415 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
IRX3P78415 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
IRX3P78415 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC17.24■□□□□ 0.35
IRX3P78415 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
IRX3P78415 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.24■□□□□ 0.35
IRX3P78415 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.24■□□□□ 0.35
IRX3P78415 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
IRX3P78415 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IRX3P78415 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
IRX3P78415 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
IRX3P78415 AC090616.6-203ENST00000579186 1945 ntBASIC17.24■□□□□ 0.35
IRX3P78415 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.24■□□□□ 0.35
IRX3P78415 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.24■□□□□ 0.35
IRX3P78415 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IRX3P78415 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.24■□□□□ 0.35
IRX3P78415 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.24■□□□□ 0.35
IRX3P78415 CEP164P1-201ENST00000455142 418 ntBASIC17.24■□□□□ 0.35
IRX3P78415 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
IRX3P78415 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC17.24■□□□□ 0.35
IRX3P78415 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.24■□□□□ 0.35
IRX3P78415 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC17.24■□□□□ 0.35
IRX3P78415 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
IRX3P78415 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IRX3P78415 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IRX3P78415 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IRX3P78415 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms