Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.63■□□□□ 0.25
CCNA1P78396 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCNA1P78396 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCNA1P78396 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
CCNA1P78396 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.63■□□□□ 0.25
CCNA1P78396 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CCNA1P78396 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.63■□□□□ 0.25
CCNA1P78396 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCNA1P78396 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCNA1P78396 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCNA1P78396 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCNA1P78396 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCNA1P78396 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCNA1P78396 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCNA1P78396 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCNA1P78396 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CCNA1P78396 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCNA1P78396 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCNA1P78396 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCNA1P78396 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCNA1P78396 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCNA1P78396 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCNA1P78396 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCNA1P78396 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCNA1P78396 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.62■□□□□ 0.25
CCNA1P78396 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCNA1P78396 TMCO5B-205ENST00000530020 894 ntBASIC16.62■□□□□ 0.25
CCNA1P78396 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCNA1P78396 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC16.62■□□□□ 0.25
CCNA1P78396 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCNA1P78396 CMC2-224ENST00000630396 481 ntTSL 5 BASIC16.62■□□□□ 0.25
CCNA1P78396 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCNA1P78396 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCNA1P78396 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCNA1P78396 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CCNA1P78396 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CCNA1P78396 AC090502.4-201ENST00000551714 1386 ntBASIC16.62■□□□□ 0.25
CCNA1P78396 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.62■□□□□ 0.25
CCNA1P78396 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCNA1P78396 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCNA1P78396 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.62■□□□□ 0.25
CCNA1P78396 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCNA1P78396 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCNA1P78396 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.62■□□□□ 0.25
CCNA1P78396 LINC01815-202ENST00000641468 1409 ntBASIC16.62■□□□□ 0.25
CCNA1P78396 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCNA1P78396 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.61■□□□□ 0.25
CCNA1P78396 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCNA1P78396 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CCNA1P78396 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC16.61■□□□□ 0.25
CCNA1P78396 RN7SL277P-201ENST00000481521 288 ntBASIC16.61■□□□□ 0.25
CCNA1P78396 AP000911.2-201ENST00000534330 502 ntBASIC16.61■□□□□ 0.25
CCNA1P78396 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC16.61■□□□□ 0.25
CCNA1P78396 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCNA1P78396 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCNA1P78396 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.61■□□□□ 0.25
CCNA1P78396 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.61■□□□□ 0.25
CCNA1P78396 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.61■□□□□ 0.25
CCNA1P78396 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCNA1P78396 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCNA1P78396 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCNA1P78396 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CCNA1P78396 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCNA1P78396 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.61■□□□□ 0.25
CCNA1P78396 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCNA1P78396 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCNA1P78396 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCNA1P78396 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCNA1P78396 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCNA1P78396 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CCNA1P78396 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCNA1P78396 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCNA1P78396 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCNA1P78396 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.61■□□□□ 0.25
CCNA1P78396 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCNA1P78396 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CCNA1P78396 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.6■□□□□ 0.25
CCNA1P78396 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCNA1P78396 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CCNA1P78396 AP002353.1-201ENST00000528257 1599 ntBASIC16.6■□□□□ 0.25
CCNA1P78396 PKD1P5-201ENST00000532415 10291 ntBASIC16.6■□□□□ 0.25
CCNA1P78396 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCNA1P78396 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCNA1P78396 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCNA1P78396 KHSRPP1-201ENST00000427983 1768 ntBASIC16.6■□□□□ 0.25
CCNA1P78396 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCNA1P78396 AC073869.2-201ENST00000417338 1026 ntBASIC16.6■□□□□ 0.25
CCNA1P78396 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCNA1P78396 AL512306.1-201ENST00000432698 848 ntBASIC16.6■□□□□ 0.25
CCNA1P78396 ALG1L13P-202ENST00000519320 584 ntBASIC16.6■□□□□ 0.25
CCNA1P78396 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCNA1P78396 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CCNA1P78396 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.6■□□□□ 0.25
CCNA1P78396 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC16.6■□□□□ 0.25
CCNA1P78396 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCNA1P78396 AC027237.1-201ENST00000560942 655 ntBASIC16.6■□□□□ 0.25
CCNA1P78396 AC140658.4-201ENST00000561990 352 ntBASIC16.6■□□□□ 0.25
CCNA1P78396 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.6■□□□□ 0.25
CCNA1P78396 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC16.6■□□□□ 0.25
CCNA1P78396 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms