Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRA2BP62995 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.91□□□□□ -0.18
TRA2BP62995 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRA2BP62995 SNX18-202ENST00000343017 3140 ntBASIC13.91□□□□□ -0.18
TRA2BP62995 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.91□□□□□ -0.18
TRA2BP62995 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.91□□□□□ -0.18
TRA2BP62995 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.91□□□□□ -0.18
TRA2BP62995 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
TRA2BP62995 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.91□□□□□ -0.18
TRA2BP62995 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRA2BP62995 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRA2BP62995 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRA2BP62995 AC016397.2-201ENST00000624848 1985 ntBASIC13.91□□□□□ -0.18
TRA2BP62995 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRA2BP62995 AC064801.2-201ENST00000625052 1303 ntBASIC13.9□□□□□ -0.18
TRA2BP62995 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.9□□□□□ -0.18
TRA2BP62995 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TRA2BP62995 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRA2BP62995 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRA2BP62995 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TRA2BP62995 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.9□□□□□ -0.18
TRA2BP62995 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.9□□□□□ -0.18
TRA2BP62995 SHC1P1-201ENST00000425230 1745 ntBASIC13.9□□□□□ -0.18
TRA2BP62995 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRA2BP62995 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRA2BP62995 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRA2BP62995 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TRA2BP62995 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRA2BP62995 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.9□□□□□ -0.18
TRA2BP62995 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
TRA2BP62995 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.9□□□□□ -0.18
TRA2BP62995 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.9□□□□□ -0.18
TRA2BP62995 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.9□□□□□ -0.18
TRA2BP62995 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.9□□□□□ -0.18
TRA2BP62995 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRA2BP62995 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.9□□□□□ -0.18
TRA2BP62995 AC234783.1-201ENST00000441761 496 ntBASIC13.9□□□□□ -0.18
TRA2BP62995 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.9□□□□□ -0.18
TRA2BP62995 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.9□□□□□ -0.18
TRA2BP62995 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRA2BP62995 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.9□□□□□ -0.18
TRA2BP62995 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.9□□□□□ -0.18
TRA2BP62995 AL136301.1-201ENST00000615830 422 ntBASIC13.9□□□□□ -0.18
TRA2BP62995 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRA2BP62995 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRA2BP62995 KRT8P4-201ENST00000509735 1454 ntBASIC13.9□□□□□ -0.18
TRA2BP62995 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.9□□□□□ -0.18
TRA2BP62995 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRA2BP62995 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRA2BP62995 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRA2BP62995 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRA2BP62995 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRA2BP62995 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRA2BP62995 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRA2BP62995 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRA2BP62995 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.9□□□□□ -0.18
TRA2BP62995 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TRA2BP62995 AC011498.7-201ENST00000624986 2027 ntBASIC13.9□□□□□ -0.18
TRA2BP62995 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRA2BP62995 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRA2BP62995 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRA2BP62995 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
TRA2BP62995 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TRA2BP62995 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.9□□□□□ -0.19
TRA2BP62995 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
TRA2BP62995 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRA2BP62995 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.89□□□□□ -0.19
TRA2BP62995 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRA2BP62995 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRA2BP62995 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRA2BP62995 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TRA2BP62995 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRA2BP62995 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
TRA2BP62995 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRA2BP62995 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRA2BP62995 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
TRA2BP62995 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRA2BP62995 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.89□□□□□ -0.19
TRA2BP62995 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRA2BP62995 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRA2BP62995 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRA2BP62995 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.89□□□□□ -0.19
TRA2BP62995 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRA2BP62995 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.89□□□□□ -0.19
TRA2BP62995 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TRA2BP62995 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRA2BP62995 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRA2BP62995 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRA2BP62995 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRA2BP62995 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRA2BP62995 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.89□□□□□ -0.19
TRA2BP62995 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRA2BP62995 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.89□□□□□ -0.19
TRA2BP62995 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.89□□□□□ -0.19
TRA2BP62995 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.89□□□□□ -0.19
TRA2BP62995 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.89□□□□□ -0.19
TRA2BP62995 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.89□□□□□ -0.19
TRA2BP62995 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRA2BP62995 CROCCP4-201ENST00000457096 498 ntBASIC13.89□□□□□ -0.19
TRA2BP62995 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms