Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RHBDL3P58872 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RHBDL3P58872 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RHBDL3P58872 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RHBDL3P58872 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RHBDL3P58872 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RHBDL3P58872 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RHBDL3P58872 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RHBDL3P58872 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RHBDL3P58872 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RHBDL3P58872 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RHBDL3P58872 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.21■□□□□ 0.35
RHBDL3P58872 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
RHBDL3P58872 LAP3P2-201ENST00000454686 1454 ntBASIC17.21■□□□□ 0.35
RHBDL3P58872 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
RHBDL3P58872 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC17.21■□□□□ 0.35
RHBDL3P58872 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RHBDL3P58872 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RHBDL3P58872 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC17.21■□□□□ 0.35
RHBDL3P58872 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RHBDL3P58872 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RHBDL3P58872 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RHBDL3P58872 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RHBDL3P58872 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.21■□□□□ 0.35
RHBDL3P58872 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC17.21■□□□□ 0.35
RHBDL3P58872 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC17.21■□□□□ 0.35
RHBDL3P58872 OR8T1P-201ENST00000421347 918 ntBASIC17.21■□□□□ 0.35
RHBDL3P58872 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC17.21■□□□□ 0.35
RHBDL3P58872 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC17.21■□□□□ 0.35
RHBDL3P58872 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC17.21■□□□□ 0.35
RHBDL3P58872 MRPL22P1-201ENST00000505398 616 ntBASIC17.21■□□□□ 0.35
RHBDL3P58872 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC17.21■□□□□ 0.35
RHBDL3P58872 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RHBDL3P58872 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC17.21■□□□□ 0.35
RHBDL3P58872 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC17.21■□□□□ 0.35
RHBDL3P58872 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RHBDL3P58872 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC17.21■□□□□ 0.35
RHBDL3P58872 AC021016.3-201ENST00000608367 477 ntBASIC17.21■□□□□ 0.35
RHBDL3P58872 AC084781.1-201ENST00000613737 656 ntBASIC17.21■□□□□ 0.35
RHBDL3P58872 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC17.21■□□□□ 0.35
RHBDL3P58872 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RHBDL3P58872 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RHBDL3P58872 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RHBDL3P58872 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RHBDL3P58872 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RHBDL3P58872 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.21■□□□□ 0.35
RHBDL3P58872 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RHBDL3P58872 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
RHBDL3P58872 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.21■□□□□ 0.34
RHBDL3P58872 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.34
RHBDL3P58872 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RHBDL3P58872 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RHBDL3P58872 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.2■□□□□ 0.34
RHBDL3P58872 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RHBDL3P58872 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RHBDL3P58872 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.2■□□□□ 0.34
RHBDL3P58872 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RHBDL3P58872 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RHBDL3P58872 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RHBDL3P58872 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RHBDL3P58872 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RHBDL3P58872 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC17.2■□□□□ 0.34
RHBDL3P58872 DNAJB1P1-201ENST00000429417 1024 ntBASIC17.2■□□□□ 0.34
RHBDL3P58872 AL627422.1-201ENST00000434104 580 ntBASIC17.2■□□□□ 0.34
RHBDL3P58872 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RHBDL3P58872 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC17.2■□□□□ 0.34
RHBDL3P58872 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC17.2■□□□□ 0.34
RHBDL3P58872 TPM1-223ENST00000560445 485 ntTSL 3 BASIC17.2■□□□□ 0.34
RHBDL3P58872 AC104506.1-201ENST00000609247 429 ntBASIC17.2■□□□□ 0.34
RHBDL3P58872 MIR6727-201ENST00000620702 65 ntBASIC17.2■□□□□ 0.34
RHBDL3P58872 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RHBDL3P58872 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RHBDL3P58872 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RHBDL3P58872 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.2■□□□□ 0.34
RHBDL3P58872 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.2■□□□□ 0.34
RHBDL3P58872 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RHBDL3P58872 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RHBDL3P58872 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RHBDL3P58872 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RHBDL3P58872 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RHBDL3P58872 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RHBDL3P58872 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RHBDL3P58872 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RHBDL3P58872 MARK2P16-201ENST00000605714 1723 ntBASIC17.19■□□□□ 0.34
RHBDL3P58872 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RHBDL3P58872 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RHBDL3P58872 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.19■□□□□ 0.34
RHBDL3P58872 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RHBDL3P58872 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RHBDL3P58872 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RHBDL3P58872 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RHBDL3P58872 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RHBDL3P58872 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RHBDL3P58872 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RHBDL3P58872 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC17.19■□□□□ 0.34
RHBDL3P58872 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RHBDL3P58872 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RHBDL3P58872 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC17.19■□□□□ 0.34
RHBDL3P58872 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RHBDL3P58872 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms