Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCKAP1LP55160 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.09■□□□□ 0.17
NCKAP1LP55160 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCKAP1LP55160 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
NCKAP1LP55160 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
NCKAP1LP55160 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NCKAP1LP55160 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
NCKAP1LP55160 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCKAP1LP55160 VDAC1P1-201ENST00000439229 848 ntBASIC16.09■□□□□ 0.17
NCKAP1LP55160 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.09■□□□□ 0.17
NCKAP1LP55160 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NCKAP1LP55160 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.09■□□□□ 0.17
NCKAP1LP55160 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.09■□□□□ 0.17
NCKAP1LP55160 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.09■□□□□ 0.17
NCKAP1LP55160 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.09■□□□□ 0.17
NCKAP1LP55160 RBM8B-201ENST00000555532 525 ntBASIC16.09■□□□□ 0.17
NCKAP1LP55160 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.09■□□□□ 0.17
NCKAP1LP55160 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
NCKAP1LP55160 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.09■□□□□ 0.17
NCKAP1LP55160 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NCKAP1LP55160 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NCKAP1LP55160 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
NCKAP1LP55160 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.09■□□□□ 0.17
NCKAP1LP55160 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCKAP1LP55160 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCKAP1LP55160 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCKAP1LP55160 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.09■□□□□ 0.17
NCKAP1LP55160 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.09■□□□□ 0.17
NCKAP1LP55160 MBLAC2-202ENST00000514906 1936 ntBASIC16.09■□□□□ 0.17
NCKAP1LP55160 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
NCKAP1LP55160 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
NCKAP1LP55160 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
NCKAP1LP55160 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCKAP1LP55160 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCKAP1LP55160 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCKAP1LP55160 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.09■□□□□ 0.17
NCKAP1LP55160 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCKAP1LP55160 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCKAP1LP55160 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.09■□□□□ 0.17
NCKAP1LP55160 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
NCKAP1LP55160 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCKAP1LP55160 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.09■□□□□ 0.17
NCKAP1LP55160 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC16.09■□□□□ 0.17
NCKAP1LP55160 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.08■□□□□ 0.17
NCKAP1LP55160 AC004899.1-201ENST00000424687 1714 ntBASIC16.08■□□□□ 0.17
NCKAP1LP55160 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
NCKAP1LP55160 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
NCKAP1LP55160 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
NCKAP1LP55160 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCKAP1LP55160 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCKAP1LP55160 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.08■□□□□ 0.16
NCKAP1LP55160 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.08■□□□□ 0.16
NCKAP1LP55160 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCKAP1LP55160 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
NCKAP1LP55160 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
NCKAP1LP55160 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCKAP1LP55160 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCKAP1LP55160 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.08■□□□□ 0.16
NCKAP1LP55160 RPL18P13-201ENST00000478088 569 ntBASIC16.08■□□□□ 0.16
NCKAP1LP55160 SERPINA13P-202ENST00000478994 924 ntBASIC16.08■□□□□ 0.16
NCKAP1LP55160 AC006122.1-201ENST00000493323 440 ntBASIC16.08■□□□□ 0.16
NCKAP1LP55160 AC126915.1-201ENST00000522847 1038 ntBASIC16.08■□□□□ 0.16
NCKAP1LP55160 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.08■□□□□ 0.16
NCKAP1LP55160 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.08■□□□□ 0.16
NCKAP1LP55160 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCKAP1LP55160 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.08■□□□□ 0.16
NCKAP1LP55160 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.08■□□□□ 0.16
NCKAP1LP55160 AL118558.3-201ENST00000607414 1079 ntBASIC16.08■□□□□ 0.16
NCKAP1LP55160 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
NCKAP1LP55160 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCKAP1LP55160 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCKAP1LP55160 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCKAP1LP55160 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NCKAP1LP55160 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCKAP1LP55160 CYP4F23P-201ENST00000593402 1579 ntBASIC16.08■□□□□ 0.16
NCKAP1LP55160 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NCKAP1LP55160 AC144522.1-201ENST00000625111 1658 ntBASIC16.08■□□□□ 0.16
NCKAP1LP55160 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
NCKAP1LP55160 AC011498.7-201ENST00000624986 2027 ntBASIC16.07■□□□□ 0.16
NCKAP1LP55160 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NCKAP1LP55160 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCKAP1LP55160 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCKAP1LP55160 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NCKAP1LP55160 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.07■□□□□ 0.16
NCKAP1LP55160 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.07■□□□□ 0.16
NCKAP1LP55160 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCKAP1LP55160 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCKAP1LP55160 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NCKAP1LP55160 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCKAP1LP55160 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
NCKAP1LP55160 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NCKAP1LP55160 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCKAP1LP55160 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
NCKAP1LP55160 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.07■□□□□ 0.16
NCKAP1LP55160 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.07■□□□□ 0.16
NCKAP1LP55160 AC006033.1-201ENST00000440505 426 ntBASIC16.07■□□□□ 0.16
NCKAP1LP55160 AC004898.1-201ENST00000451057 766 ntBASIC16.07■□□□□ 0.16
NCKAP1LP55160 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NCKAP1LP55160 HLA-J-204ENST00000495278 958 ntBASIC16.07■□□□□ 0.16
NCKAP1LP55160 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms