Protein–RNA interactions for Protein: P55008

AIF1, Allograft inflammatory factor 1, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AIF1P55008 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AIF1P55008 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
AIF1P55008 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AIF1P55008 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AIF1P55008 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AIF1P55008 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.16■□□□□ 0.02
AIF1P55008 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
AIF1P55008 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.16■□□□□ 0.02
AIF1P55008 AC244394.1-201ENST00000435000 1665 ntBASIC15.16■□□□□ 0.02
AIF1P55008 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AIF1P55008 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.15■□□□□ 0.02
AIF1P55008 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
AIF1P55008 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AIF1P55008 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AIF1P55008 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
AIF1P55008 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
AIF1P55008 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AIF1P55008 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
AIF1P55008 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AIF1P55008 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
AIF1P55008 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.15■□□□□ 0.02
AIF1P55008 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AIF1P55008 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AIF1P55008 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AIF1P55008 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
AIF1P55008 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.15■□□□□ 0.02
AIF1P55008 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AIF1P55008 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.15■□□□□ 0.02
AIF1P55008 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.15■□□□□ 0.02
AIF1P55008 TUBB8P8-201ENST00000458717 1058 ntBASIC15.15■□□□□ 0.02
AIF1P55008 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.15■□□□□ 0.02
AIF1P55008 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AIF1P55008 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.15■□□□□ 0.02
AIF1P55008 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.15■□□□□ 0.02
AIF1P55008 RN7SL560P-201ENST00000577943 264 ntBASIC15.15■□□□□ 0.02
AIF1P55008 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AIF1P55008 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.15■□□□□ 0.02
AIF1P55008 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
AIF1P55008 TCAM1P-207ENST00000485295 1537 ntBASIC15.15■□□□□ 0.02
AIF1P55008 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AIF1P55008 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AIF1P55008 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
AIF1P55008 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
AIF1P55008 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AIF1P55008 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.15■□□□□ 0.02
AIF1P55008 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
AIF1P55008 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AIF1P55008 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AIF1P55008 TUBB1P2-201ENST00000422712 1306 ntBASIC15.15■□□□□ 0.02
AIF1P55008 TUBB1P1-201ENST00000503144 1300 ntBASIC15.15■□□□□ 0.02
AIF1P55008 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AIF1P55008 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AIF1P55008 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AIF1P55008 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AIF1P55008 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AIF1P55008 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
AIF1P55008 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
AIF1P55008 AC011498.7-201ENST00000624986 2027 ntBASIC15.14■□□□□ 0.01
AIF1P55008 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
AIF1P55008 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
AIF1P55008 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
AIF1P55008 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.14■□□□□ 0.01
AIF1P55008 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AIF1P55008 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AIF1P55008 TMBIM7P-202ENST00000641474 1516 ntBASIC15.14■□□□□ 0.01
AIF1P55008 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
AIF1P55008 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
AIF1P55008 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AIF1P55008 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AIF1P55008 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
AIF1P55008 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
AIF1P55008 BNIP3P42-201ENST00000454982 569 ntBASIC15.14■□□□□ 0.01
AIF1P55008 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.14■□□□□ 0.01
AIF1P55008 RPSAP36-202ENST00000494591 1261 ntBASIC15.14■□□□□ 0.01
AIF1P55008 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
AIF1P55008 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.14■□□□□ 0.01
AIF1P55008 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.14■□□□□ 0.01
AIF1P55008 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AIF1P55008 AL583810.1-201ENST00000553344 1045 ntBASIC15.14■□□□□ 0.01
AIF1P55008 RBM8B-201ENST00000555532 525 ntBASIC15.14■□□□□ 0.01
AIF1P55008 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.14■□□□□ 0.01
AIF1P55008 MIR4783-201ENST00000580343 82 ntBASIC15.14■□□□□ 0.01
AIF1P55008 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.14■□□□□ 0.01
AIF1P55008 BNIP3P29-201ENST00000598302 571 ntBASIC15.14■□□□□ 0.01
AIF1P55008 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.14■□□□□ 0.01
AIF1P55008 AP000346.4-201ENST00000614827 381 ntBASIC15.14■□□□□ 0.01
AIF1P55008 AC011447.5-201ENST00000616168 564 ntBASIC15.14■□□□□ 0.01
AIF1P55008 AL023803.2-201ENST00000620080 638 ntBASIC15.14■□□□□ 0.01
AIF1P55008 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
AIF1P55008 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.14■□□□□ 0.01
AIF1P55008 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
AIF1P55008 Z98259.2-201ENST00000641583 609 ntBASIC15.14■□□□□ 0.01
AIF1P55008 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AIF1P55008 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
AIF1P55008 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
AIF1P55008 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AIF1P55008 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
AIF1P55008 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
AIF1P55008 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AIF1P55008 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms