Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
EPHA4P54764 AC009093.10-201ENST00000641956 1442 ntBASIC14.21□□□□□ -0.13
EPHA4P54764 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA4P54764 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
EPHA4P54764 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
EPHA4P54764 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.21□□□□□ -0.14
EPHA4P54764 AC008132.1-202ENST00000342005 1389 ntBASIC14.21□□□□□ -0.14
EPHA4P54764 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
EPHA4P54764 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
EPHA4P54764 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
EPHA4P54764 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA4P54764 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA4P54764 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
EPHA4P54764 AC144522.1-201ENST00000625111 1658 ntBASIC14.2□□□□□ -0.14
EPHA4P54764 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA4P54764 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA4P54764 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
EPHA4P54764 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.2□□□□□ -0.14
EPHA4P54764 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.2□□□□□ -0.14
EPHA4P54764 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.2□□□□□ -0.14
EPHA4P54764 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA4P54764 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
EPHA4P54764 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA4P54764 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA4P54764 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA4P54764 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.2□□□□□ -0.14
EPHA4P54764 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.2□□□□□ -0.14
EPHA4P54764 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA4P54764 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA4P54764 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA4P54764 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
EPHA4P54764 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
EPHA4P54764 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.2□□□□□ -0.14
EPHA4P54764 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
EPHA4P54764 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA4P54764 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
EPHA4P54764 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.2□□□□□ -0.14
EPHA4P54764 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA4P54764 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.2□□□□□ -0.14
EPHA4P54764 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA4P54764 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
EPHA4P54764 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA4P54764 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.2□□□□□ -0.14
EPHA4P54764 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.2□□□□□ -0.14
EPHA4P54764 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.2□□□□□ -0.14
EPHA4P54764 RN7SL769P-201ENST00000469386 295 ntBASIC14.2□□□□□ -0.14
EPHA4P54764 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.2□□□□□ -0.14
EPHA4P54764 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.2□□□□□ -0.14
EPHA4P54764 AC090857.1-201ENST00000527400 390 ntBASIC14.2□□□□□ -0.14
EPHA4P54764 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA4P54764 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.2□□□□□ -0.14
EPHA4P54764 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.2□□□□□ -0.14
EPHA4P54764 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.2□□□□□ -0.14
EPHA4P54764 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA4P54764 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA4P54764 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA4P54764 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA4P54764 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.2□□□□□ -0.14
EPHA4P54764 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.2□□□□□ -0.14
EPHA4P54764 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA4P54764 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA4P54764 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
EPHA4P54764 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA4P54764 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA4P54764 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.2□□□□□ -0.14
EPHA4P54764 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA4P54764 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA4P54764 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA4P54764 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
EPHA4P54764 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
EPHA4P54764 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA4P54764 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA4P54764 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA4P54764 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA4P54764 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
EPHA4P54764 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.19□□□□□ -0.14
EPHA4P54764 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA4P54764 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA4P54764 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
EPHA4P54764 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA4P54764 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA4P54764 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.19□□□□□ -0.14
EPHA4P54764 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA4P54764 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
EPHA4P54764 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
EPHA4P54764 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA4P54764 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.19□□□□□ -0.14
EPHA4P54764 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA4P54764 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.19□□□□□ -0.14
EPHA4P54764 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.19□□□□□ -0.14
EPHA4P54764 ACTG1P2-201ENST00000415776 1125 ntBASIC14.19□□□□□ -0.14
EPHA4P54764 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.19□□□□□ -0.14
EPHA4P54764 ACTG1P11-201ENST00000425411 1125 ntBASIC14.19□□□□□ -0.14
EPHA4P54764 AL596276.2-201ENST00000447525 331 ntBASIC14.19□□□□□ -0.14
EPHA4P54764 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.19□□□□□ -0.14
EPHA4P54764 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.19□□□□□ -0.14
EPHA4P54764 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.19□□□□□ -0.14
EPHA4P54764 RN7SL720P-201ENST00000488178 304 ntBASIC14.19□□□□□ -0.14
EPHA4P54764 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.19□□□□□ -0.14
EPHA4P54764 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms