Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB28P51157 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB28P51157 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
RAB28P51157 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB28P51157 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB28P51157 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB28P51157 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB28P51157 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB28P51157 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB28P51157 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB28P51157 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB28P51157 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RAB28P51157 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB28P51157 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB28P51157 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB28P51157 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RAB28P51157 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB28P51157 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.23□□□□□ -0.13
RAB28P51157 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RAB28P51157 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB28P51157 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB28P51157 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RAB28P51157 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB28P51157 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB28P51157 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB28P51157 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB28P51157 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.23□□□□□ -0.13
RAB28P51157 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB28P51157 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB28P51157 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB28P51157 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
RAB28P51157 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.23□□□□□ -0.13
RAB28P51157 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.23□□□□□ -0.13
RAB28P51157 AC108725.1-201ENST00000495472 409 ntBASIC14.23□□□□□ -0.13
RAB28P51157 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB28P51157 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.23□□□□□ -0.13
RAB28P51157 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB28P51157 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB28P51157 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
RAB28P51157 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB28P51157 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RAB28P51157 AC009884.2-201ENST00000603110 324 ntBASIC14.23□□□□□ -0.13
RAB28P51157 AC007663.3-201ENST00000609632 465 ntBASIC14.23□□□□□ -0.13
RAB28P51157 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RAB28P51157 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB28P51157 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB28P51157 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
RAB28P51157 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB28P51157 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB28P51157 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB28P51157 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB28P51157 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB28P51157 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.23□□□□□ -0.13
RAB28P51157 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB28P51157 LINC00552-201ENST00000625151 2579 ntBASIC14.23□□□□□ -0.13
RAB28P51157 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
RAB28P51157 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
RAB28P51157 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB28P51157 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB28P51157 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RAB28P51157 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB28P51157 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RAB28P51157 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB28P51157 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB28P51157 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB28P51157 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.22□□□□□ -0.13
RAB28P51157 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB28P51157 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB28P51157 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB28P51157 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
RAB28P51157 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB28P51157 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RAB28P51157 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RAB28P51157 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB28P51157 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB28P51157 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB28P51157 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RAB28P51157 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
RAB28P51157 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB28P51157 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB28P51157 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RAB28P51157 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.22□□□□□ -0.13
RAB28P51157 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB28P51157 AL157407.1-201ENST00000435784 904 ntBASIC14.22□□□□□ -0.13
RAB28P51157 AC104306.2-201ENST00000451877 341 ntBASIC14.22□□□□□ -0.13
RAB28P51157 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RAB28P51157 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB28P51157 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB28P51157 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.22□□□□□ -0.13
RAB28P51157 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
RAB28P51157 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.22□□□□□ -0.13
RAB28P51157 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB28P51157 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB28P51157 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB28P51157 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.22□□□□□ -0.13
RAB28P51157 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.22□□□□□ -0.13
RAB28P51157 AL008638.5-201ENST00000623814 1298 ntBASIC14.22□□□□□ -0.13
RAB28P51157 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB28P51157 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
RAB28P51157 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms