Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF144AP50876 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF144AP50876 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF144AP50876 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF144AP50876 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF144AP50876 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.83□□□□□ -0.2
RNF144AP50876 AC005840.4-201ENST00000541242 2494 ntBASIC13.83□□□□□ -0.2
RNF144AP50876 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
RNF144AP50876 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF144AP50876 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.83□□□□□ -0.2
RNF144AP50876 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF144AP50876 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF144AP50876 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RNF144AP50876 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RNF144AP50876 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RNF144AP50876 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.82□□□□□ -0.2
RNF144AP50876 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RNF144AP50876 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.82□□□□□ -0.2
RNF144AP50876 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF144AP50876 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF144AP50876 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RNF144AP50876 AC136759.1-202ENST00000530858 2194 ntBASIC13.82□□□□□ -0.2
RNF144AP50876 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RNF144AP50876 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.82□□□□□ -0.2
RNF144AP50876 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF144AP50876 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
RNF144AP50876 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RNF144AP50876 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF144AP50876 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RNF144AP50876 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
RNF144AP50876 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.82□□□□□ -0.2
RNF144AP50876 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF144AP50876 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
RNF144AP50876 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RNF144AP50876 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF144AP50876 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF144AP50876 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF144AP50876 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.82□□□□□ -0.2
RNF144AP50876 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF144AP50876 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF144AP50876 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF144AP50876 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF144AP50876 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF144AP50876 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.82□□□□□ -0.2
RNF144AP50876 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF144AP50876 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RNF144AP50876 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.82□□□□□ -0.2
RNF144AP50876 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
RNF144AP50876 ACTBP8-201ENST00000403258 1108 ntBASIC13.82□□□□□ -0.2
RNF144AP50876 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
RNF144AP50876 BAATP1-201ENST00000412284 1225 ntBASIC13.82□□□□□ -0.2
RNF144AP50876 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF144AP50876 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.82□□□□□ -0.2
RNF144AP50876 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.82□□□□□ -0.2
RNF144AP50876 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.82□□□□□ -0.2
RNF144AP50876 TTTY23B-201ENST00000442790 549 ntBASIC13.82□□□□□ -0.2
RNF144AP50876 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF144AP50876 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.82□□□□□ -0.2
RNF144AP50876 AC022137.2-201ENST00000503482 481 ntBASIC13.82□□□□□ -0.2
RNF144AP50876 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RNF144AP50876 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RNF144AP50876 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RNF144AP50876 PTP4A1P2-201ENST00000546033 454 ntBASIC13.82□□□□□ -0.2
RNF144AP50876 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.82□□□□□ -0.2
RNF144AP50876 AC009486.1-201ENST00000569860 813 ntBASIC13.82□□□□□ -0.2
RNF144AP50876 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.82□□□□□ -0.2
RNF144AP50876 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC13.82□□□□□ -0.2
RNF144AP50876 AC008735.3-201ENST00000596646 500 ntBASIC13.82□□□□□ -0.2
RNF144AP50876 ECM1P1-201ENST00000604092 1279 ntBASIC13.82□□□□□ -0.2
RNF144AP50876 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.82□□□□□ -0.2
RNF144AP50876 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.82□□□□□ -0.2
RNF144AP50876 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.82□□□□□ -0.2
RNF144AP50876 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.82□□□□□ -0.2
RNF144AP50876 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RNF144AP50876 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.82□□□□□ -0.2
RNF144AP50876 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF144AP50876 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF144AP50876 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RNF144AP50876 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.82□□□□□ -0.2
RNF144AP50876 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF144AP50876 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RNF144AP50876 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.82□□□□□ -0.2
RNF144AP50876 AC027601.5-201ENST00000624065 2482 ntBASIC13.82□□□□□ -0.2
RNF144AP50876 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RNF144AP50876 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF144AP50876 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF144AP50876 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF144AP50876 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.82□□□□□ -0.2
RNF144AP50876 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RNF144AP50876 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
RNF144AP50876 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RNF144AP50876 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF144AP50876 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF144AP50876 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF144AP50876 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
RNF144AP50876 SALL4P5-201ENST00000419001 1760 ntBASIC13.81□□□□□ -0.2
RNF144AP50876 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF144AP50876 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
RNF144AP50876 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RNF144AP50876 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms