Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.2□□□□□ -0.3
SRP9P49458 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SRP9P49458 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.2□□□□□ -0.3
SRP9P49458 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.2□□□□□ -0.3
SRP9P49458 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.2□□□□□ -0.3
SRP9P49458 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
SRP9P49458 AC190387.1-201ENST00000551683 408 ntBASIC13.2□□□□□ -0.3
SRP9P49458 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.2□□□□□ -0.3
SRP9P49458 AL391069.4-201ENST00000609583 481 ntBASIC13.2□□□□□ -0.3
SRP9P49458 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.2□□□□□ -0.3
SRP9P49458 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.2□□□□□ -0.3
SRP9P49458 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.2□□□□□ -0.3
SRP9P49458 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.2□□□□□ -0.3
SRP9P49458 AC007431.3-201ENST00000623221 587 ntBASIC13.2□□□□□ -0.3
SRP9P49458 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SRP9P49458 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SRP9P49458 CLK3P2-201ENST00000427566 1453 ntBASIC13.2□□□□□ -0.3
SRP9P49458 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.2□□□□□ -0.3
SRP9P49458 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SRP9P49458 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SRP9P49458 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SRP9P49458 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.2□□□□□ -0.3
SRP9P49458 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SRP9P49458 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SRP9P49458 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
SRP9P49458 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SRP9P49458 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SRP9P49458 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
SRP9P49458 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.2□□□□□ -0.3
SRP9P49458 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.2□□□□□ -0.3
SRP9P49458 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SRP9P49458 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SRP9P49458 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SRP9P49458 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
SRP9P49458 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SRP9P49458 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
SRP9P49458 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
SRP9P49458 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SRP9P49458 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRP9P49458 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRP9P49458 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SRP9P49458 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRP9P49458 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRP9P49458 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.19□□□□□ -0.3
SRP9P49458 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SRP9P49458 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRP9P49458 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRP9P49458 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.19□□□□□ -0.3
SRP9P49458 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRP9P49458 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
SRP9P49458 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SRP9P49458 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SRP9P49458 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.19□□□□□ -0.3
SRP9P49458 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SRP9P49458 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.19□□□□□ -0.3
SRP9P49458 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SRP9P49458 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRP9P49458 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRP9P49458 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRP9P49458 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SRP9P49458 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.19□□□□□ -0.3
SRP9P49458 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.19□□□□□ -0.3
SRP9P49458 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.19□□□□□ -0.3
SRP9P49458 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SRP9P49458 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.19□□□□□ -0.3
SRP9P49458 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.19□□□□□ -0.3
SRP9P49458 MYCLP2-201ENST00000449268 967 ntBASIC13.19□□□□□ -0.3
SRP9P49458 CRB3P1-201ENST00000449338 276 ntBASIC13.19□□□□□ -0.3
SRP9P49458 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.19□□□□□ -0.3
SRP9P49458 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.19□□□□□ -0.3
SRP9P49458 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.19□□□□□ -0.3
SRP9P49458 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SRP9P49458 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRP9P49458 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.19□□□□□ -0.3
SRP9P49458 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRP9P49458 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRP9P49458 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.19□□□□□ -0.3
SRP9P49458 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRP9P49458 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRP9P49458 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
SRP9P49458 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRP9P49458 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.19□□□□□ -0.3
SRP9P49458 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
SRP9P49458 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SRP9P49458 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRP9P49458 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SRP9P49458 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.19□□□□□ -0.3
SRP9P49458 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRP9P49458 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SRP9P49458 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SRP9P49458 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SRP9P49458 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.18□□□□□ -0.3
SRP9P49458 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
SRP9P49458 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SRP9P49458 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.18□□□□□ -0.3
SRP9P49458 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SRP9P49458 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SRP9P49458 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SRP9P49458 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.18□□□□□ -0.3
SRP9P49458 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms