Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC17.46■□□□□ 0.39
TNNI2P48788 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC17.46■□□□□ 0.39
TNNI2P48788 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC17.46■□□□□ 0.39
TNNI2P48788 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC17.46■□□□□ 0.39
TNNI2P48788 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TNNI2P48788 AC138894.2-201ENST00000602838 371 ntBASIC17.46■□□□□ 0.39
TNNI2P48788 AC005632.3-201ENST00000605544 308 ntBASIC17.46■□□□□ 0.39
TNNI2P48788 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNNI2P48788 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TNNI2P48788 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TNNI2P48788 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TNNI2P48788 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TNNI2P48788 FAS-202ENST00000352159 1722 ntTSL 5 BASIC17.46■□□□□ 0.39
TNNI2P48788 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNNI2P48788 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNNI2P48788 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNNI2P48788 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC17.46■□□□□ 0.39
TNNI2P48788 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TNNI2P48788 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TNNI2P48788 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.46■□□□□ 0.39
TNNI2P48788 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TNNI2P48788 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TNNI2P48788 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
TNNI2P48788 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.45■□□□□ 0.38
TNNI2P48788 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.45■□□□□ 0.38
TNNI2P48788 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNNI2P48788 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNNI2P48788 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNNI2P48788 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNNI2P48788 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.45■□□□□ 0.38
TNNI2P48788 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNNI2P48788 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNNI2P48788 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TNNI2P48788 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNNI2P48788 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.45■□□□□ 0.38
TNNI2P48788 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TNNI2P48788 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNNI2P48788 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNNI2P48788 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNNI2P48788 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TNNI2P48788 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC17.45■□□□□ 0.38
TNNI2P48788 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TNNI2P48788 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC17.45■□□□□ 0.38
TNNI2P48788 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TNNI2P48788 CFL1-206ENST00000527344 962 ntTSL 2 BASIC17.45■□□□□ 0.38
TNNI2P48788 DNM1P30-201ENST00000563586 452 ntBASIC17.45■□□□□ 0.38
TNNI2P48788 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TNNI2P48788 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC17.45■□□□□ 0.38
TNNI2P48788 YRDCP1-201ENST00000621419 643 ntBASIC17.45■□□□□ 0.38
TNNI2P48788 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNNI2P48788 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNNI2P48788 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNNI2P48788 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.45■□□□□ 0.38
TNNI2P48788 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TNNI2P48788 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNNI2P48788 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNNI2P48788 F10-203ENST00000409306 1450 ntTSL 3 BASIC17.44■□□□□ 0.38
TNNI2P48788 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TNNI2P48788 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNNI2P48788 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
TNNI2P48788 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.44■□□□□ 0.38
TNNI2P48788 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC17.44■□□□□ 0.38
TNNI2P48788 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
TNNI2P48788 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNNI2P48788 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNNI2P48788 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNNI2P48788 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNNI2P48788 TMBIM7P-202ENST00000641474 1516 ntBASIC17.44■□□□□ 0.38
TNNI2P48788 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TNNI2P48788 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNNI2P48788 AL512430.1-201ENST00000392575 860 ntBASIC17.44■□□□□ 0.38
TNNI2P48788 BANF1P3-201ENST00000412556 261 ntBASIC17.44■□□□□ 0.38
TNNI2P48788 FOS-204ENST00000554617 796 ntTSL 2 BASIC17.44■□□□□ 0.38
TNNI2P48788 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC17.44■□□□□ 0.38
TNNI2P48788 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNNI2P48788 AP001065.2-201ENST00000617205 644 ntBASIC17.44■□□□□ 0.38
TNNI2P48788 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC17.44■□□□□ 0.38
TNNI2P48788 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TNNI2P48788 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNNI2P48788 AC006486.2-201ENST00000624246 2199 ntBASIC17.44■□□□□ 0.38
TNNI2P48788 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TNNI2P48788 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TNNI2P48788 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNNI2P48788 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNNI2P48788 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TNNI2P48788 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNNI2P48788 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TNNI2P48788 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNNI2P48788 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNNI2P48788 MRPL37P1-201ENST00000592451 1337 ntBASIC17.44■□□□□ 0.38
TNNI2P48788 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNNI2P48788 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TNNI2P48788 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TNNI2P48788 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNNI2P48788 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.43■□□□□ 0.38
TNNI2P48788 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TNNI2P48788 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TNNI2P48788 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
TNNI2P48788 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.43■□□□□ 0.38
TNNI2P48788 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms