Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABRA4P48169 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
GABRA4P48169 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.92□□□□□ -0.18
GABRA4P48169 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABRA4P48169 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GABRA4P48169 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABRA4P48169 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.92□□□□□ -0.18
GABRA4P48169 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.92□□□□□ -0.18
GABRA4P48169 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
GABRA4P48169 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.92□□□□□ -0.18
GABRA4P48169 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABRA4P48169 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABRA4P48169 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GABRA4P48169 MIR769-201ENST00000390225 118 ntBASIC13.92□□□□□ -0.18
GABRA4P48169 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
GABRA4P48169 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.92□□□□□ -0.18
GABRA4P48169 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.92□□□□□ -0.18
GABRA4P48169 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.92□□□□□ -0.18
GABRA4P48169 AL596276.2-201ENST00000447525 331 ntBASIC13.92□□□□□ -0.18
GABRA4P48169 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.92□□□□□ -0.18
GABRA4P48169 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.92□□□□□ -0.18
GABRA4P48169 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.92□□□□□ -0.18
GABRA4P48169 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.92□□□□□ -0.18
GABRA4P48169 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC13.92□□□□□ -0.18
GABRA4P48169 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.92□□□□□ -0.18
GABRA4P48169 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.92□□□□□ -0.18
GABRA4P48169 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.92□□□□□ -0.18
GABRA4P48169 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.92□□□□□ -0.18
GABRA4P48169 AL157813.1-201ENST00000612996 587 ntBASIC13.92□□□□□ -0.18
GABRA4P48169 AL021578.1-201ENST00000613646 709 ntBASIC13.92□□□□□ -0.18
GABRA4P48169 LINC02228-204ENST00000642115 2962 ntBASIC13.92□□□□□ -0.18
GABRA4P48169 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GABRA4P48169 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABRA4P48169 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABRA4P48169 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
GABRA4P48169 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
GABRA4P48169 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GABRA4P48169 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABRA4P48169 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABRA4P48169 AGGF1P1-201ENST00000509500 2073 ntBASIC13.92□□□□□ -0.18
GABRA4P48169 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GABRA4P48169 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABRA4P48169 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABRA4P48169 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABRA4P48169 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GABRA4P48169 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABRA4P48169 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABRA4P48169 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
GABRA4P48169 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABRA4P48169 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABRA4P48169 AL157791.1-201ENST00000553667 1699 ntBASIC13.91□□□□□ -0.18
GABRA4P48169 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABRA4P48169 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.91□□□□□ -0.18
GABRA4P48169 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABRA4P48169 MYADML-201ENST00000474610 2147 ntBASIC13.91□□□□□ -0.18
GABRA4P48169 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABRA4P48169 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
GABRA4P48169 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
GABRA4P48169 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABRA4P48169 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABRA4P48169 NORAD-201ENST00000565493 5339 ntBASIC13.91□□□□□ -0.18
GABRA4P48169 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABRA4P48169 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
GABRA4P48169 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
GABRA4P48169 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABRA4P48169 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.91□□□□□ -0.18
GABRA4P48169 ST13P19-201ENST00000442505 1124 ntBASIC13.91□□□□□ -0.18
GABRA4P48169 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.91□□□□□ -0.18
GABRA4P48169 AC024681.1-201ENST00000521917 487 ntBASIC13.91□□□□□ -0.18
GABRA4P48169 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.91□□□□□ -0.18
GABRA4P48169 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
GABRA4P48169 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
GABRA4P48169 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
GABRA4P48169 AC027237.1-201ENST00000560942 655 ntBASIC13.91□□□□□ -0.18
GABRA4P48169 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
GABRA4P48169 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.91□□□□□ -0.18
GABRA4P48169 RN7SL574P-201ENST00000581512 297 ntBASIC13.91□□□□□ -0.18
GABRA4P48169 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.91□□□□□ -0.18
GABRA4P48169 AP001505.2-201ENST00000616815 443 ntBASIC13.91□□□□□ -0.18
GABRA4P48169 AC091544.8-201ENST00000619490 361 ntBASIC13.91□□□□□ -0.18
GABRA4P48169 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.91□□□□□ -0.18
GABRA4P48169 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABRA4P48169 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
GABRA4P48169 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABRA4P48169 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.91□□□□□ -0.18
GABRA4P48169 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
GABRA4P48169 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
GABRA4P48169 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.91□□□□□ -0.18
GABRA4P48169 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABRA4P48169 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABRA4P48169 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.91□□□□□ -0.18
GABRA4P48169 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABRA4P48169 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.91□□□□□ -0.18
GABRA4P48169 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.91□□□□□ -0.18
GABRA4P48169 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GABRA4P48169 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.91□□□□□ -0.18
GABRA4P48169 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.9□□□□□ -0.18
GABRA4P48169 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABRA4P48169 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABRA4P48169 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms