Protein–RNA interactions for Protein: P36222

CHI3L1, Chitinase-3-like protein 1, humanhuman

Predicted RBP Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHI3L1P36222 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CHI3L1P36222 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHI3L1P36222 AL136172.1-201ENST00000598590 1394 ntBASIC14.06□□□□□ -0.16
CHI3L1P36222 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHI3L1P36222 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHI3L1P36222 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHI3L1P36222 AC092135.3-201ENST00000624151 1846 ntBASIC14.06□□□□□ -0.16
CHI3L1P36222 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHI3L1P36222 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.06□□□□□ -0.16
CHI3L1P36222 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.06□□□□□ -0.16
CHI3L1P36222 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHI3L1P36222 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
CHI3L1P36222 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHI3L1P36222 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CHI3L1P36222 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHI3L1P36222 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHI3L1P36222 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
CHI3L1P36222 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHI3L1P36222 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CHI3L1P36222 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.05□□□□□ -0.16
CHI3L1P36222 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHI3L1P36222 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHI3L1P36222 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHI3L1P36222 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHI3L1P36222 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHI3L1P36222 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHI3L1P36222 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CHI3L1P36222 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHI3L1P36222 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CHI3L1P36222 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.05□□□□□ -0.16
CHI3L1P36222 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHI3L1P36222 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.05□□□□□ -0.16
CHI3L1P36222 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHI3L1P36222 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHI3L1P36222 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHI3L1P36222 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.05□□□□□ -0.16
CHI3L1P36222 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.05□□□□□ -0.16
CHI3L1P36222 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.05□□□□□ -0.16
CHI3L1P36222 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.05□□□□□ -0.16
CHI3L1P36222 TLE1P1-201ENST00000422965 589 ntBASIC14.05□□□□□ -0.16
CHI3L1P36222 EIF3FP3-201ENST00000434851 1086 ntBASIC14.05□□□□□ -0.16
CHI3L1P36222 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.05□□□□□ -0.16
CHI3L1P36222 UGT1A2P-201ENST00000454886 866 ntBASIC14.05□□□□□ -0.16
CHI3L1P36222 CYMP-203ENST00000474680 1263 ntBASIC14.05□□□□□ -0.16
CHI3L1P36222 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.05□□□□□ -0.16
CHI3L1P36222 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.05□□□□□ -0.16
CHI3L1P36222 SERBP1P5-201ENST00000510079 1181 ntBASIC14.05□□□□□ -0.16
CHI3L1P36222 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.05□□□□□ -0.16
CHI3L1P36222 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.05□□□□□ -0.16
CHI3L1P36222 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.05□□□□□ -0.16
CHI3L1P36222 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHI3L1P36222 GPALPP1-207ENST00000611650 899 ntBASIC14.05□□□□□ -0.16
CHI3L1P36222 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHI3L1P36222 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHI3L1P36222 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHI3L1P36222 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHI3L1P36222 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CHI3L1P36222 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHI3L1P36222 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHI3L1P36222 AC041040.2-201ENST00000622926 2899 ntBASIC14.05□□□□□ -0.16
CHI3L1P36222 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHI3L1P36222 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHI3L1P36222 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CHI3L1P36222 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CHI3L1P36222 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHI3L1P36222 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHI3L1P36222 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHI3L1P36222 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.05□□□□□ -0.16
CHI3L1P36222 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.05□□□□□ -0.16
CHI3L1P36222 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
CHI3L1P36222 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.05□□□□□ -0.16
CHI3L1P36222 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CHI3L1P36222 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHI3L1P36222 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.05□□□□□ -0.16
CHI3L1P36222 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHI3L1P36222 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.05□□□□□ -0.16
CHI3L1P36222 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHI3L1P36222 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHI3L1P36222 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHI3L1P36222 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.05□□□□□ -0.16
CHI3L1P36222 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHI3L1P36222 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHI3L1P36222 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.04□□□□□ -0.16
CHI3L1P36222 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CHI3L1P36222 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CHI3L1P36222 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHI3L1P36222 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.04□□□□□ -0.16
CHI3L1P36222 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHI3L1P36222 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHI3L1P36222 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CHI3L1P36222 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHI3L1P36222 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHI3L1P36222 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.04□□□□□ -0.16
CHI3L1P36222 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC14.04□□□□□ -0.16
CHI3L1P36222 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CHI3L1P36222 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHI3L1P36222 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHI3L1P36222 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CHI3L1P36222 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CHI3L1P36222 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms