Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
KRT2P35908 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT2P35908 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.91■□□□□ 0.3
KRT2P35908 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT2P35908 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.91■□□□□ 0.3
KRT2P35908 KRT8P28-201ENST00000433288 1390 ntBASIC16.91■□□□□ 0.3
KRT2P35908 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.91■□□□□ 0.3
KRT2P35908 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.91■□□□□ 0.3
KRT2P35908 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.91■□□□□ 0.3
KRT2P35908 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.91■□□□□ 0.3
KRT2P35908 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KRT2P35908 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KRT2P35908 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT2P35908 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT2P35908 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
KRT2P35908 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.91■□□□□ 0.3
KRT2P35908 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.91■□□□□ 0.3
KRT2P35908 CICP12-201ENST00000455801 843 ntBASIC16.91■□□□□ 0.3
KRT2P35908 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.91■□□□□ 0.3
KRT2P35908 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.91■□□□□ 0.3
KRT2P35908 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.91■□□□□ 0.3
KRT2P35908 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.91■□□□□ 0.3
KRT2P35908 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
KRT2P35908 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.91■□□□□ 0.3
KRT2P35908 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.91■□□□□ 0.3
KRT2P35908 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
KRT2P35908 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.91■□□□□ 0.3
KRT2P35908 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT2P35908 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT2P35908 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KRT2P35908 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
KRT2P35908 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT2P35908 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KRT2P35908 AC027601.5-201ENST00000624065 2482 ntBASIC16.91■□□□□ 0.3
KRT2P35908 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT2P35908 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT2P35908 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT2P35908 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KRT2P35908 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT2P35908 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT2P35908 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT2P35908 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.9■□□□□ 0.3
KRT2P35908 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KRT2P35908 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
KRT2P35908 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
KRT2P35908 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT2P35908 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.9■□□□□ 0.3
KRT2P35908 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
KRT2P35908 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT2P35908 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT2P35908 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.9■□□□□ 0.3
KRT2P35908 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
KRT2P35908 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT2P35908 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT2P35908 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
KRT2P35908 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT2P35908 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT2P35908 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT2P35908 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.9■□□□□ 0.3
KRT2P35908 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KRT2P35908 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
KRT2P35908 AC010141.1-201ENST00000411585 623 ntBASIC16.9■□□□□ 0.3
KRT2P35908 AC099336.1-201ENST00000417053 1171 ntBASIC16.9■□□□□ 0.3
KRT2P35908 HLA-V-201ENST00000429037 534 ntBASIC16.9■□□□□ 0.3
KRT2P35908 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.9■□□□□ 0.3
KRT2P35908 AC022210.1-201ENST00000449856 793 ntBASIC16.9■□□□□ 0.3
KRT2P35908 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.9■□□□□ 0.3
KRT2P35908 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.9■□□□□ 0.3
KRT2P35908 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.9■□□□□ 0.3
KRT2P35908 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KRT2P35908 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT2P35908 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
KRT2P35908 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT2P35908 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT2P35908 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT2P35908 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.9■□□□□ 0.3
KRT2P35908 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT2P35908 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
KRT2P35908 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT2P35908 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KRT2P35908 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT2P35908 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.9■□□□□ 0.3
KRT2P35908 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
KRT2P35908 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT2P35908 SHC1P1-201ENST00000425230 1745 ntBASIC16.9■□□□□ 0.3
KRT2P35908 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT2P35908 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT2P35908 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.9■□□□□ 0.3
KRT2P35908 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT2P35908 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KRT2P35908 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
KRT2P35908 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
KRT2P35908 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.89■□□□□ 0.3
KRT2P35908 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.89■□□□□ 0.3
KRT2P35908 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
KRT2P35908 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
KRT2P35908 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC16.89■□□□□ 0.29
KRT2P35908 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KRT2P35908 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.89■□□□□ 0.29
KRT2P35908 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms