Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CKS2P33552 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC10.92□□□□□ -0.66
CKS2P33552 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CKS2P33552 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC10.92□□□□□ -0.66
CKS2P33552 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC10.92□□□□□ -0.66
CKS2P33552 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC10.92□□□□□ -0.66
CKS2P33552 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC10.92□□□□□ -0.66
CKS2P33552 AC093909.1-201ENST00000504731 1122 ntBASIC10.92□□□□□ -0.66
CKS2P33552 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC10.92□□□□□ -0.66
CKS2P33552 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC10.92□□□□□ -0.66
CKS2P33552 AC079776.4-201ENST00000511039 504 ntBASIC10.92□□□□□ -0.66
CKS2P33552 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CKS2P33552 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC10.92□□□□□ -0.66
CKS2P33552 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC10.92□□□□□ -0.66
CKS2P33552 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC10.92□□□□□ -0.66
CKS2P33552 AL121912.1-201ENST00000603683 238 ntBASIC10.92□□□□□ -0.66
CKS2P33552 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
CKS2P33552 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
CKS2P33552 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CKS2P33552 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
CKS2P33552 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CKS2P33552 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CKS2P33552 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC10.92□□□□□ -0.66
CKS2P33552 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC10.92□□□□□ -0.66
CKS2P33552 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CKS2P33552 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC10.92□□□□□ -0.66
CKS2P33552 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CKS2P33552 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC10.92□□□□□ -0.66
CKS2P33552 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
CKS2P33552 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CKS2P33552 AC068760.1-201ENST00000493579 1953 ntBASIC10.92□□□□□ -0.66
CKS2P33552 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CKS2P33552 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
CKS2P33552 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC10.92□□□□□ -0.66
CKS2P33552 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC10.92□□□□□ -0.66
CKS2P33552 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC10.92□□□□□ -0.66
CKS2P33552 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC10.92□□□□□ -0.66
CKS2P33552 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
CKS2P33552 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CKS2P33552 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC10.92□□□□□ -0.66
CKS2P33552 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
CKS2P33552 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
CKS2P33552 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CKS2P33552 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
CKS2P33552 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CKS2P33552 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CKS2P33552 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC10.91□□□□□ -0.66
CKS2P33552 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CKS2P33552 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
CKS2P33552 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC10.91□□□□□ -0.66
CKS2P33552 AL122018.1-201ENST00000446607 2310 ntBASIC10.91□□□□□ -0.66
CKS2P33552 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CKS2P33552 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC10.91□□□□□ -0.66
CKS2P33552 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CKS2P33552 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC10.91□□□□□ -0.66
CKS2P33552 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CKS2P33552 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CKS2P33552 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CKS2P33552 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC10.91□□□□□ -0.66
CKS2P33552 RN7SL832P-201ENST00000607781 1756 ntBASIC10.91□□□□□ -0.66
CKS2P33552 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CKS2P33552 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CKS2P33552 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC10.91□□□□□ -0.66
CKS2P33552 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
CKS2P33552 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CKS2P33552 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
CKS2P33552 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CKS2P33552 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CKS2P33552 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CKS2P33552 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
CKS2P33552 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
CKS2P33552 CSF3-203ENST00000394148 622 ntTSL 3 BASIC10.91□□□□□ -0.66
CKS2P33552 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC10.91□□□□□ -0.66
CKS2P33552 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC10.91□□□□□ -0.66
CKS2P33552 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CKS2P33552 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC10.91□□□□□ -0.66
CKS2P33552 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC10.91□□□□□ -0.66
CKS2P33552 PDPK2P-202ENST00000562415 1191 ntBASIC10.91□□□□□ -0.66
CKS2P33552 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
CKS2P33552 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC10.91□□□□□ -0.66
CKS2P33552 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
CKS2P33552 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC10.91□□□□□ -0.66
CKS2P33552 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC10.91□□□□□ -0.66
CKS2P33552 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC10.91□□□□□ -0.66
CKS2P33552 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CKS2P33552 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CKS2P33552 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CKS2P33552 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
CKS2P33552 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CKS2P33552 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CKS2P33552 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CKS2P33552 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CKS2P33552 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC10.91□□□□□ -0.66
CKS2P33552 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CKS2P33552 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CKS2P33552 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CKS2P33552 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CKS2P33552 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC10.91□□□□□ -0.66
CKS2P33552 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC10.91□□□□□ -0.66
CKS2P33552 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC10.91□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms