Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTPN6P29350 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PTPN6P29350 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PTPN6P29350 AC011498.7-201ENST00000624986 2027 ntBASIC14.03□□□□□ -0.16
PTPN6P29350 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PTPN6P29350 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PTPN6P29350 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
PTPN6P29350 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PTPN6P29350 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PTPN6P29350 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
PTPN6P29350 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PTPN6P29350 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
PTPN6P29350 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
PTPN6P29350 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.03□□□□□ -0.16
PTPN6P29350 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PTPN6P29350 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PTPN6P29350 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
PTPN6P29350 ACTBP8-201ENST00000403258 1108 ntBASIC14.03□□□□□ -0.16
PTPN6P29350 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.03□□□□□ -0.16
PTPN6P29350 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.03□□□□□ -0.16
PTPN6P29350 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PTPN6P29350 USP32P1-208ENST00000506594 1164 ntBASIC14.03□□□□□ -0.16
PTPN6P29350 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PTPN6P29350 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
PTPN6P29350 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
PTPN6P29350 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PTPN6P29350 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.03□□□□□ -0.16
PTPN6P29350 AC106886.1-201ENST00000568660 600 ntBASIC14.03□□□□□ -0.16
PTPN6P29350 AC009486.1-201ENST00000569860 813 ntBASIC14.03□□□□□ -0.16
PTPN6P29350 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PTPN6P29350 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PTPN6P29350 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.03□□□□□ -0.16
PTPN6P29350 KRT8P35-201ENST00000483942 1338 ntBASIC14.03□□□□□ -0.16
PTPN6P29350 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PTPN6P29350 AL136172.1-201ENST00000598590 1394 ntBASIC14.03□□□□□ -0.16
PTPN6P29350 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PTPN6P29350 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PTPN6P29350 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PTPN6P29350 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PTPN6P29350 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PTPN6P29350 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.03□□□□□ -0.16
PTPN6P29350 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PTPN6P29350 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.03□□□□□ -0.16
PTPN6P29350 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PTPN6P29350 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.03□□□□□ -0.16
PTPN6P29350 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PTPN6P29350 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.03□□□□□ -0.16
PTPN6P29350 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
PTPN6P29350 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
PTPN6P29350 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PTPN6P29350 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PTPN6P29350 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PTPN6P29350 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PTPN6P29350 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PTPN6P29350 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PTPN6P29350 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
PTPN6P29350 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PTPN6P29350 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PTPN6P29350 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PTPN6P29350 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PTPN6P29350 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.02□□□□□ -0.16
PTPN6P29350 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PTPN6P29350 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
PTPN6P29350 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
PTPN6P29350 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
PTPN6P29350 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PTPN6P29350 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PTPN6P29350 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PTPN6P29350 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
PTPN6P29350 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
PTPN6P29350 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
PTPN6P29350 MRPL37P1-201ENST00000592451 1337 ntBASIC14.02□□□□□ -0.17
PTPN6P29350 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PTPN6P29350 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
PTPN6P29350 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.02□□□□□ -0.17
PTPN6P29350 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PTPN6P29350 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PTPN6P29350 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.02□□□□□ -0.17
PTPN6P29350 AC093433.1-201ENST00000458048 571 ntBASIC14.02□□□□□ -0.17
PTPN6P29350 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.02□□□□□ -0.17
PTPN6P29350 GCOM2-201ENST00000509133 1104 ntBASIC14.02□□□□□ -0.17
PTPN6P29350 PTP4A1P2-201ENST00000546033 454 ntBASIC14.02□□□□□ -0.17
PTPN6P29350 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.02□□□□□ -0.17
PTPN6P29350 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.02□□□□□ -0.17
PTPN6P29350 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.02□□□□□ -0.17
PTPN6P29350 AP005019.2-201ENST00000615104 511 ntBASIC14.02□□□□□ -0.17
PTPN6P29350 AL162274.1-201ENST00000617191 1098 ntBASIC14.02□□□□□ -0.17
PTPN6P29350 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PTPN6P29350 AP001002.3-201ENST00000623482 206 ntBASIC14.02□□□□□ -0.17
PTPN6P29350 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PTPN6P29350 OR2I1P-209ENST00000641730 5365 ntBASIC14.02□□□□□ -0.17
PTPN6P29350 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PTPN6P29350 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PTPN6P29350 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PTPN6P29350 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PTPN6P29350 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.02□□□□□ -0.17
PTPN6P29350 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PTPN6P29350 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
PTPN6P29350 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PTPN6P29350 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms