Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.19■□□□□ 0.02
ERCC2P18074 AC008825.2-201ENST00000603374 718 ntBASIC15.19■□□□□ 0.02
ERCC2P18074 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.19■□□□□ 0.02
ERCC2P18074 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC2P18074 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.19■□□□□ 0.02
ERCC2P18074 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.19■□□□□ 0.02
ERCC2P18074 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC2P18074 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
ERCC2P18074 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC2P18074 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC2P18074 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
ERCC2P18074 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
ERCC2P18074 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC2P18074 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
ERCC2P18074 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.19■□□□□ 0.02
ERCC2P18074 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC2P18074 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC2P18074 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC2P18074 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
ERCC2P18074 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC2P18074 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC2P18074 AC117489.1-201ENST00000625169 3217 ntBASIC15.19■□□□□ 0.02
ERCC2P18074 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ERCC2P18074 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC2P18074 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC2P18074 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC2P18074 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
ERCC2P18074 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC2P18074 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC2P18074 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC2P18074 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC2P18074 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.18■□□□□ 0.02
ERCC2P18074 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC2P18074 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC2P18074 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.18■□□□□ 0.02
ERCC2P18074 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.18■□□□□ 0.02
ERCC2P18074 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.18■□□□□ 0.02
ERCC2P18074 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC2P18074 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC2P18074 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
ERCC2P18074 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC2P18074 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC2P18074 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC2P18074 OR8S1-201ENST00000310194 1080 ntBASIC15.18■□□□□ 0.02
ERCC2P18074 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC2P18074 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC2P18074 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC2P18074 AC010141.1-201ENST00000411585 623 ntBASIC15.18■□□□□ 0.02
ERCC2P18074 CICP12-201ENST00000455801 843 ntBASIC15.18■□□□□ 0.02
ERCC2P18074 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC2P18074 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.18■□□□□ 0.02
ERCC2P18074 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.18■□□□□ 0.02
ERCC2P18074 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.18■□□□□ 0.02
ERCC2P18074 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.18■□□□□ 0.02
ERCC2P18074 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC2P18074 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.18■□□□□ 0.02
ERCC2P18074 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC2P18074 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
ERCC2P18074 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC2P18074 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC2P18074 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC2P18074 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC2P18074 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC2P18074 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.18■□□□□ 0.02
ERCC2P18074 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC2P18074 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC2P18074 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC2P18074 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC2P18074 AC097376.2-205ENST00000610159 5334 ntBASIC15.18■□□□□ 0.02
ERCC2P18074 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC2P18074 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ERCC2P18074 SHC1P1-201ENST00000425230 1745 ntBASIC15.17■□□□□ 0.02
ERCC2P18074 AL023775.1-201ENST00000454907 1746 ntBASIC15.17■□□□□ 0.02
ERCC2P18074 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.17■□□□□ 0.02
ERCC2P18074 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC2P18074 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
ERCC2P18074 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC2P18074 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC2P18074 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.17■□□□□ 0.02
ERCC2P18074 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC2P18074 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
ERCC2P18074 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC2P18074 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC2P18074 KRT8P28-201ENST00000433288 1390 ntBASIC15.17■□□□□ 0.02
ERCC2P18074 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC2P18074 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.17■□□□□ 0.02
ERCC2P18074 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC2P18074 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC2P18074 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.17■□□□□ 0.02
ERCC2P18074 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC2P18074 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.17■□□□□ 0.02
ERCC2P18074 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC2P18074 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC2P18074 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.17■□□□□ 0.02
ERCC2P18074 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.17■□□□□ 0.02
ERCC2P18074 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
ERCC2P18074 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
ERCC2P18074 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC2P18074 MIR6805-201ENST00000615055 62 ntBASIC15.17■□□□□ 0.02
ERCC2P18074 AC027601.3-201ENST00000622907 509 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms