Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.01□□□□□ -0.17
NCK1P16333 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.01□□□□□ -0.17
NCK1P16333 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NCK1P16333 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NCK1P16333 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NCK1P16333 AC011840.2-201ENST00000563063 1520 ntBASIC14.01□□□□□ -0.17
NCK1P16333 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NCK1P16333 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NCK1P16333 AC020658.7-201ENST00000624274 2442 ntBASIC14.01□□□□□ -0.17
NCK1P16333 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
NCK1P16333 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
NCK1P16333 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NCK1P16333 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NCK1P16333 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
NCK1P16333 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NCK1P16333 AL022342.1-201ENST00000400363 863 ntBASIC14.01□□□□□ -0.17
NCK1P16333 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.01□□□□□ -0.17
NCK1P16333 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.01□□□□□ -0.17
NCK1P16333 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.01□□□□□ -0.17
NCK1P16333 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.01□□□□□ -0.17
NCK1P16333 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.01□□□□□ -0.17
NCK1P16333 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.01□□□□□ -0.17
NCK1P16333 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.01□□□□□ -0.17
NCK1P16333 AL671883.3-201ENST00000603274 991 ntBASIC14.01□□□□□ -0.17
NCK1P16333 AL844908.2-201ENST00000609461 460 ntBASIC14.01□□□□□ -0.17
NCK1P16333 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.01□□□□□ -0.17
NCK1P16333 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.01□□□□□ -0.17
NCK1P16333 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NCK1P16333 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NCK1P16333 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NCK1P16333 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NCK1P16333 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NCK1P16333 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
NCK1P16333 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.01□□□□□ -0.17
NCK1P16333 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
NCK1P16333 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NCK1P16333 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NCK1P16333 AC004899.2-201ENST00000622993 3860 ntBASIC14.01□□□□□ -0.17
NCK1P16333 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NCK1P16333 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.01□□□□□ -0.17
NCK1P16333 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NCK1P16333 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NCK1P16333 AL157996.1-201ENST00000624684 2299 ntBASIC14.01□□□□□ -0.17
NCK1P16333 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NCK1P16333 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NCK1P16333 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NCK1P16333 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14□□□□□ -0.17
NCK1P16333 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14□□□□□ -0.17
NCK1P16333 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
NCK1P16333 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NCK1P16333 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14□□□□□ -0.17
NCK1P16333 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NCK1P16333 AC090643.2-201ENST00000623442 2029 ntBASIC14□□□□□ -0.17
NCK1P16333 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
NCK1P16333 AL136172.1-201ENST00000598590 1394 ntBASIC14□□□□□ -0.17
NCK1P16333 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NCK1P16333 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NCK1P16333 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NCK1P16333 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NCK1P16333 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
NCK1P16333 HNRNPFP1-201ENST00000391730 1133 ntBASIC14□□□□□ -0.17
NCK1P16333 COA5-202ENST00000409997 557 ntTSL 4 BASIC14□□□□□ -0.17
NCK1P16333 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14□□□□□ -0.17
NCK1P16333 AL589987.1-201ENST00000453380 819 ntBASIC14□□□□□ -0.17
NCK1P16333 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14□□□□□ -0.17
NCK1P16333 AC112482.1-201ENST00000492080 688 ntBASIC14□□□□□ -0.17
NCK1P16333 AC027369.6-201ENST00000525520 931 ntBASIC14□□□□□ -0.17
NCK1P16333 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14□□□□□ -0.17
NCK1P16333 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14□□□□□ -0.17
NCK1P16333 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14□□□□□ -0.17
NCK1P16333 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14□□□□□ -0.17
NCK1P16333 AC092337.1-201ENST00000568699 1129 ntBASIC14□□□□□ -0.17
NCK1P16333 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14□□□□□ -0.17
NCK1P16333 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14□□□□□ -0.17
NCK1P16333 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14□□□□□ -0.17
NCK1P16333 AL596442.2-201ENST00000610240 980 ntBASIC14□□□□□ -0.17
NCK1P16333 5S_rRNA.22-201ENST00000614916 106 ntBASIC14□□□□□ -0.17
NCK1P16333 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14□□□□□ -0.17
NCK1P16333 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14□□□□□ -0.17
NCK1P16333 MEX3B-202ENST00000558133 4333 ntBASIC14□□□□□ -0.17
NCK1P16333 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NCK1P16333 SALL4P5-201ENST00000419001 1760 ntBASIC14□□□□□ -0.17
NCK1P16333 AC015909.5-201ENST00000624336 2266 ntBASIC14□□□□□ -0.17
NCK1P16333 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
NCK1P16333 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14□□□□□ -0.17
NCK1P16333 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14□□□□□ -0.17
NCK1P16333 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NCK1P16333 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NCK1P16333 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
NCK1P16333 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14□□□□□ -0.17
NCK1P16333 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14□□□□□ -0.17
NCK1P16333 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14□□□□□ -0.17
NCK1P16333 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NCK1P16333 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14□□□□□ -0.17
NCK1P16333 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NCK1P16333 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC14□□□□□ -0.17
NCK1P16333 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NCK1P16333 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NCK1P16333 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NCK1P16333 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms