Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 NCLP1-201ENST00000445357 1963 ntBASIC11.16□□□□□ -0.62
LTAP01374 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC11.16□□□□□ -0.62
LTAP01374 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC11.16□□□□□ -0.62
LTAP01374 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LTAP01374 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LTAP01374 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LTAP01374 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LTAP01374 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LTAP01374 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC11.15□□□□□ -0.62
LTAP01374 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LTAP01374 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC11.15□□□□□ -0.62
LTAP01374 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC11.15□□□□□ -0.62
LTAP01374 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
LTAP01374 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC11.15□□□□□ -0.62
LTAP01374 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC11.15□□□□□ -0.62
LTAP01374 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC11.15□□□□□ -0.62
LTAP01374 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LTAP01374 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
LTAP01374 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC11.15□□□□□ -0.62
LTAP01374 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LTAP01374 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LTAP01374 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LTAP01374 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC11.15□□□□□ -0.62
LTAP01374 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LTAP01374 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
LTAP01374 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
LTAP01374 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
LTAP01374 OS9-218ENST00000551035 2246 ntTSL 2 BASIC11.15□□□□□ -0.62
LTAP01374 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
LTAP01374 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LTAP01374 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LTAP01374 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
LTAP01374 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
LTAP01374 PMP22-202ENST00000395936 816 ntTSL 3 BASIC11.15□□□□□ -0.62
LTAP01374 CENPM-205ENST00000404067 905 ntTSL 3 BASIC11.15□□□□□ -0.62
LTAP01374 CENPM-206ENST00000407253 818 ntTSL 2 BASIC11.15□□□□□ -0.62
LTAP01374 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LTAP01374 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LTAP01374 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC11.15□□□□□ -0.62
LTAP01374 TIMM17BP1-201ENST00000545713 516 ntBASIC11.15□□□□□ -0.62
LTAP01374 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC11.15□□□□□ -0.62
LTAP01374 TEX28P1-201ENST00000613479 1221 ntBASIC11.15□□□□□ -0.62
LTAP01374 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC11.15□□□□□ -0.62
LTAP01374 TEX28P2-201ENST00000617764 1221 ntBASIC11.15□□□□□ -0.62
LTAP01374 AP001059.3-201ENST00000619053 235 ntBASIC11.15□□□□□ -0.62
LTAP01374 AL158212.4-201ENST00000624062 1286 ntBASIC11.15□□□□□ -0.62
LTAP01374 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC11.15□□□□□ -0.62
LTAP01374 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LTAP01374 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LTAP01374 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC11.15□□□□□ -0.62
LTAP01374 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
LTAP01374 DRD5P1-201ENST00000456605 1438 ntBASIC11.15□□□□□ -0.62
LTAP01374 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LTAP01374 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LTAP01374 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LTAP01374 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LTAP01374 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LTAP01374 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LTAP01374 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
LTAP01374 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC11.15□□□□□ -0.62
LTAP01374 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LTAP01374 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC11.15□□□□□ -0.63
LTAP01374 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
LTAP01374 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
LTAP01374 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
LTAP01374 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC11.15□□□□□ -0.63
LTAP01374 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC11.15□□□□□ -0.63
LTAP01374 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
LTAP01374 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
LTAP01374 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
LTAP01374 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
LTAP01374 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.63
LTAP01374 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC11.14□□□□□ -0.63
LTAP01374 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LTAP01374 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
LTAP01374 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC11.14□□□□□ -0.63
LTAP01374 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
LTAP01374 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LTAP01374 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
LTAP01374 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LTAP01374 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LTAP01374 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LTAP01374 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LTAP01374 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LTAP01374 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC11.14□□□□□ -0.63
LTAP01374 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LTAP01374 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LTAP01374 AC003102.2-201ENST00000589195 1469 ntBASIC11.14□□□□□ -0.63
LTAP01374 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
LTAP01374 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LTAP01374 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LTAP01374 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
LTAP01374 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LTAP01374 AC019294.4-201ENST00000561777 2905 ntBASIC11.14□□□□□ -0.63
LTAP01374 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LTAP01374 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
LTAP01374 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
LTAP01374 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
LTAP01374 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC11.14□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms