Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFBP01127 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFBP01127 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFBP01127 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFBP01127 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.58□□□□□ -0.08
PDGFBP01127 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.58□□□□□ -0.08
PDGFBP01127 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.58□□□□□ -0.08
PDGFBP01127 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFBP01127 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
PDGFBP01127 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFBP01127 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
PDGFBP01127 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFBP01127 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFBP01127 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFBP01127 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFBP01127 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC14.58□□□□□ -0.08
PDGFBP01127 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFBP01127 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC14.58□□□□□ -0.08
PDGFBP01127 AL512599.1-201ENST00000430724 685 ntBASIC14.58□□□□□ -0.08
PDGFBP01127 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFBP01127 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
PDGFBP01127 RN7SL375P-201ENST00000492442 298 ntBASIC14.58□□□□□ -0.08
PDGFBP01127 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFBP01127 KRT18P37-201ENST00000520711 1282 ntBASIC14.58□□□□□ -0.08
PDGFBP01127 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
PDGFBP01127 VENTXP3-201ENST00000546480 773 ntBASIC14.58□□□□□ -0.08
PDGFBP01127 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.58□□□□□ -0.08
PDGFBP01127 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.58□□□□□ -0.08
PDGFBP01127 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC14.58□□□□□ -0.08
PDGFBP01127 NT5C-204ENST00000578337 582 ntTSL 2 BASIC14.58□□□□□ -0.08
PDGFBP01127 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC14.58□□□□□ -0.08
PDGFBP01127 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFBP01127 APOC1-209ENST00000592885 562 ntTSL 3 BASIC14.58□□□□□ -0.08
PDGFBP01127 AL133467.4-201ENST00000602953 725 ntBASIC14.58□□□□□ -0.08
PDGFBP01127 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC14.58□□□□□ -0.08
PDGFBP01127 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
PDGFBP01127 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.58□□□□□ -0.08
PDGFBP01127 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
PDGFBP01127 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFBP01127 AL590440.2-201ENST00000641973 1595 ntBASIC14.58□□□□□ -0.08
PDGFBP01127 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFBP01127 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
PDGFBP01127 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFBP01127 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
PDGFBP01127 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
PDGFBP01127 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFBP01127 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.58□□□□□ -0.08
PDGFBP01127 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFBP01127 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
PDGFBP01127 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFBP01127 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.58□□□□□ -0.08
PDGFBP01127 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
PDGFBP01127 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFBP01127 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
PDGFBP01127 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.58□□□□□ -0.08
PDGFBP01127 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFBP01127 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.58□□□□□ -0.08
PDGFBP01127 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.57□□□□□ -0.08
PDGFBP01127 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
PDGFBP01127 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.57□□□□□ -0.08
PDGFBP01127 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFBP01127 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFBP01127 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
PDGFBP01127 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.57□□□□□ -0.08
PDGFBP01127 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFBP01127 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFBP01127 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC14.57□□□□□ -0.08
PDGFBP01127 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PDGFBP01127 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFBP01127 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFBP01127 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PDGFBP01127 AC092850.2-201ENST00000623821 2697 ntBASIC14.57□□□□□ -0.08
PDGFBP01127 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFBP01127 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFBP01127 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFBP01127 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PDGFBP01127 AC027612.2-202ENST00000445955 1199 ntBASIC14.57□□□□□ -0.08
PDGFBP01127 NAA40-205ENST00000539656 577 ntTSL 4 BASIC14.57□□□□□ -0.08
PDGFBP01127 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.57□□□□□ -0.08
PDGFBP01127 FOXN3-AS2-201ENST00000554071 1262 ntBASIC14.57□□□□□ -0.08
PDGFBP01127 KRT8P2-201ENST00000556193 944 ntBASIC14.57□□□□□ -0.08
PDGFBP01127 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC14.57□□□□□ -0.08
PDGFBP01127 DUT-207ENST00000559416 635 ntTSL 2 BASIC14.57□□□□□ -0.08
PDGFBP01127 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.57□□□□□ -0.08
PDGFBP01127 GAS7-216ENST00000583882 553 ntTSL 5 BASIC14.57□□□□□ -0.08
PDGFBP01127 CR392039.1-201ENST00000623217 204 ntBASIC14.57□□□□□ -0.08
PDGFBP01127 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.57□□□□□ -0.08
PDGFBP01127 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFBP01127 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFBP01127 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFBP01127 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFBP01127 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFBP01127 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.57□□□□□ -0.08
PDGFBP01127 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
PDGFBP01127 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFBP01127 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.57□□□□□ -0.08
PDGFBP01127 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFBP01127 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
PDGFBP01127 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFBP01127 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms