Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CNOT4O95628 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CNOT4O95628 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.21□□□□□ -0.29
CNOT4O95628 Z93015.1-201ENST00000451718 390 ntBASIC13.21□□□□□ -0.29
CNOT4O95628 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CNOT4O95628 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CNOT4O95628 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CNOT4O95628 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CNOT4O95628 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.21□□□□□ -0.29
CNOT4O95628 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.21□□□□□ -0.29
CNOT4O95628 AL118558.3-201ENST00000607414 1079 ntBASIC13.21□□□□□ -0.29
CNOT4O95628 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
CNOT4O95628 RETN-203ENST00000629642 400 ntTSL 5 BASIC13.21□□□□□ -0.29
CNOT4O95628 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CNOT4O95628 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CNOT4O95628 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CNOT4O95628 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CNOT4O95628 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CNOT4O95628 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CNOT4O95628 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
CNOT4O95628 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
CNOT4O95628 AL009178.2-201ENST00000597278 2719 ntBASIC13.21□□□□□ -0.29
CNOT4O95628 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.21□□□□□ -0.29
CNOT4O95628 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CNOT4O95628 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CNOT4O95628 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CNOT4O95628 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.21□□□□□ -0.3
CNOT4O95628 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.21□□□□□ -0.3
CNOT4O95628 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CNOT4O95628 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CNOT4O95628 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
CNOT4O95628 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.21□□□□□ -0.3
CNOT4O95628 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CNOT4O95628 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.2□□□□□ -0.3
CNOT4O95628 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CNOT4O95628 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
CNOT4O95628 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.2□□□□□ -0.3
CNOT4O95628 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CNOT4O95628 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.2□□□□□ -0.3
CNOT4O95628 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 AL138725.1-201ENST00000407347 1314 ntBASIC13.2□□□□□ -0.3
CNOT4O95628 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CNOT4O95628 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.2□□□□□ -0.3
CNOT4O95628 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CNOT4O95628 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.2□□□□□ -0.3
CNOT4O95628 AC015818.8-201ENST00000587907 1519 ntBASIC13.2□□□□□ -0.3
CNOT4O95628 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CNOT4O95628 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.2□□□□□ -0.3
CNOT4O95628 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.2□□□□□ -0.3
CNOT4O95628 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
CNOT4O95628 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
CNOT4O95628 RN7SKP175-201ENST00000408472 289 ntBASIC13.2□□□□□ -0.3
CNOT4O95628 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CNOT4O95628 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.2□□□□□ -0.3
CNOT4O95628 AC006033.1-201ENST00000440505 426 ntBASIC13.2□□□□□ -0.3
CNOT4O95628 AL391280.1-201ENST00000506969 1062 ntBASIC13.2□□□□□ -0.3
CNOT4O95628 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.2□□□□□ -0.3
CNOT4O95628 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.2□□□□□ -0.3
CNOT4O95628 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.2□□□□□ -0.3
CNOT4O95628 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.2□□□□□ -0.3
CNOT4O95628 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.2□□□□□ -0.3
CNOT4O95628 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.2□□□□□ -0.3
CNOT4O95628 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.2□□□□□ -0.3
CNOT4O95628 AC008825.2-201ENST00000603374 718 ntBASIC13.2□□□□□ -0.3
CNOT4O95628 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.2□□□□□ -0.3
CNOT4O95628 AC244157.2-201ENST00000616239 1006 ntBASIC13.2□□□□□ -0.3
CNOT4O95628 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.2□□□□□ -0.3
CNOT4O95628 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.2□□□□□ -0.3
CNOT4O95628 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 AC087386.2-201ENST00000623212 4637 ntBASIC13.2□□□□□ -0.3
CNOT4O95628 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CNOT4O95628 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 1937.1 ms