Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.69■□□□□ 0.1
CAPN9O14815 AC018442.1-201ENST00000421439 2061 ntBASIC15.69■□□□□ 0.1
CAPN9O14815 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CAPN9O14815 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.69■□□□□ 0.1
CAPN9O14815 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN9O14815 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.69■□□□□ 0.1
CAPN9O14815 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN9O14815 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CAPN9O14815 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.69■□□□□ 0.1
CAPN9O14815 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN9O14815 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.68■□□□□ 0.1
CAPN9O14815 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN9O14815 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN9O14815 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN9O14815 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN9O14815 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN9O14815 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN9O14815 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.68■□□□□ 0.1
CAPN9O14815 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.68■□□□□ 0.1
CAPN9O14815 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CAPN9O14815 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CAPN9O14815 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN9O14815 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.68■□□□□ 0.1
CAPN9O14815 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN9O14815 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.68■□□□□ 0.1
CAPN9O14815 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CAPN9O14815 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN9O14815 ANKRD19P-201ENST00000338192 862 ntBASIC15.68■□□□□ 0.1
CAPN9O14815 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN9O14815 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.68■□□□□ 0.1
CAPN9O14815 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN9O14815 TLE1P1-201ENST00000422965 589 ntBASIC15.68■□□□□ 0.1
CAPN9O14815 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN9O14815 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.68■□□□□ 0.1
CAPN9O14815 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.68■□□□□ 0.1
CAPN9O14815 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN9O14815 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN9O14815 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.68■□□□□ 0.1
CAPN9O14815 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.68■□□□□ 0.1
CAPN9O14815 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.68■□□□□ 0.1
CAPN9O14815 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.68■□□□□ 0.1
CAPN9O14815 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.68■□□□□ 0.1
CAPN9O14815 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.68■□□□□ 0.1
CAPN9O14815 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CAPN9O14815 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN9O14815 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.68■□□□□ 0.1
CAPN9O14815 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.68■□□□□ 0.1
CAPN9O14815 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
CAPN9O14815 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN9O14815 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CAPN9O14815 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN9O14815 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.68■□□□□ 0.1
CAPN9O14815 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.68■□□□□ 0.1
CAPN9O14815 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
CAPN9O14815 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN9O14815 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN9O14815 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.68■□□□□ 0.1
CAPN9O14815 AC117489.1-201ENST00000625169 3217 ntBASIC15.68■□□□□ 0.1
CAPN9O14815 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CAPN9O14815 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN9O14815 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN9O14815 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CAPN9O14815 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN9O14815 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.67■□□□□ 0.1
CAPN9O14815 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CAPN9O14815 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN9O14815 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.67■□□□□ 0.1
CAPN9O14815 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN9O14815 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN9O14815 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.67■□□□□ 0.1
CAPN9O14815 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN9O14815 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.67■□□□□ 0.1
CAPN9O14815 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.67■□□□□ 0.1
CAPN9O14815 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.67■□□□□ 0.1
CAPN9O14815 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.67■□□□□ 0.1
CAPN9O14815 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN9O14815 MIR4525-201ENST00000580000 75 ntBASIC15.67■□□□□ 0.1
CAPN9O14815 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.67■□□□□ 0.1
CAPN9O14815 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CAPN9O14815 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.67■□□□□ 0.1
CAPN9O14815 COX11-210ENST00000639671 696 ntBASIC15.67■□□□□ 0.1
CAPN9O14815 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN9O14815 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN9O14815 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN9O14815 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN9O14815 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CAPN9O14815 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.67■□□□□ 0.1
CAPN9O14815 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN9O14815 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN9O14815 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.67■□□□□ 0.1
CAPN9O14815 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN9O14815 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN9O14815 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CAPN9O14815 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
CAPN9O14815 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CAPN9O14815 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CAPN9O14815 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.66■□□□□ 0.1
CAPN9O14815 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN9O14815 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.66■□□□□ 0.1
CAPN9O14815 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms