Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 PLEKHA3-201ENST00000234453 13880 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 COL12A1-203ENST00000416123 8964 ntTSL 5 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 NME1-209ENST00000511355 1645 ntTSL 5 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 PIK3R3-201ENST00000262741 5609 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 VLDLR-203ENST00000382100 9163 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 MB21D1-201ENST00000370315 3182 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 POM121L14P-201ENST00000406100 1558 ntBASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 KRT8P24-201ENST00000560290 1559 ntBASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 NFASC-207ENST00000404907 5447 ntAPPRIS ALT1 TSL 5 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 SLC37A2-201ENST00000308074 2696 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 SLC9A7P1-202ENST00000556476 2239 ntBASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 STK25-235ENST00000543554 2556 ntTSL 2 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC8.13□□□□□ -1.11
CHKB-CPT1BH3BT56 PPP1R26P2-201ENST00000611403 3595 ntBASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 LGALS8-219ENST00000526589 6420 ntAPPRIS P4 TSL 5 BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 INTS6L-206ENST00000639893 3904 ntTSL 5 BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 AC092338.2-201ENST00000568827 1415 ntBASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 AC015802.1-201ENST00000588104 1449 ntBASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 FBLN2-201ENST00000295760 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 FRMPD1-203ENST00000539465 5465 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 ZNF423-207ENST00000567169 4017 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 PIK3R4-201ENST00000356763 5015 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 RPAP1-201ENST00000304330 4665 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 SRI-203ENST00000419179 1307 ntTSL 2 BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 TP73-213ENST00000604479 1623 ntTSL 5 BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 DEPDC5-222ENST00000535622 5155 ntTSL 2 BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 CCDC129-201ENST00000319386 4544 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 IGHGP-201ENST00000390555 1178 ntBASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 AC245100.5-201ENST00000452108 331 ntBASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 COX5A-202ENST00000562233 441 ntTSL 3 BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 COX5A-204ENST00000567270 579 ntTSL 3 BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 CYP2A7P1-201ENST00000595391 815 ntBASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 AC008403.3-201ENST00000598924 454 ntBASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 CD177P1-201ENST00000606252 935 ntBASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 AC133041.1-202ENST00000642053 222 ntBASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 LARGE1-202ENST00000397394 4138 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 ABI1-203ENST00000376137 3467 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 ACIN1-222ENST00000557515 2751 ntTSL 5 BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 PITX2-202ENST00000354925 3359 ntAPPRIS ALT1 TSL 2 BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 RNF219-AS1-209ENST00000606429 2418 ntTSL 2 BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 SEMA4D-211ENST00000438547 4824 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 SRRT-215ENST00000614484 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CHKB-CPT1BH3BT56 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms