Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 FAM8A2P-201ENST00000528813 1142 ntBASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC138951.2-201ENST00000623455 1161 ntBASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC136759.1-202ENST00000530858 2194 ntBASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AP001267.2-201ENST00000532619 2086 ntBASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC015802.1-201ENST00000588104 1449 ntBASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 RPS15-201ENST00000233609 534 ntTSL 2 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TPM3P8-201ENST00000330554 643 ntBASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 KLF2P2-201ENST00000416807 1039 ntBASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 FAM197Y7-201ENST00000432892 766 ntBASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PFN1P12-201ENST00000455938 534 ntBASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 MIR4538-201ENST00000581377 78 ntBASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 RPS15-205ENST00000586686 562 ntTSL 5 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 RPS15-208ENST00000591804 711 ntTSL 5 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC132938.4-201ENST00000623835 848 ntBASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms