Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 HLA-V-204ENST00000476601 1289 ntBASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 AC092337.1-201ENST00000568699 1129 ntBASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 CES1P1-201ENST00000421606 1704 ntBASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TCRBV3S1A0A5B6 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 AL391647.1-201ENST00000395664 511 ntBASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 SPDYE7P-202ENST00000420373 878 ntBASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 KRT18P8-201ENST00000581937 1246 ntBASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 AP001002.3-201ENST00000623482 206 ntBASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 AC009093.7-201ENST00000623853 1223 ntBASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 AC118758.2-201ENST00000614242 2813 ntBASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 AC139712.1-201ENST00000378256 1875 ntBASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TCRBV3S1A0A5B6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TCRBV3S1A0A5B6 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TCRBV3S1A0A5B6 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TCRBV3S1A0A5B6 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TCRBV3S1A0A5B6 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TCRBV3S1A0A5B6 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TCRBV3S1A0A5B6 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TCRBV3S1A0A5B6 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms