Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 SEPT9-204ENST00000427180 3635 ntTSL 2 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 HSPA8P9-201ENST00000485881 1943 ntBASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 SLC18A1-204ENST00000437980 2822 ntTSL 5 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 ZNF630-206ENST00000442455 2829 ntAPPRIS P2 TSL 4 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 AC022384.1-202ENST00000450534 2831 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 ADAMTS20-201ENST00000389420 6076 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 UBTF-206ENST00000527034 3010 ntTSL 5 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 AC004623.1-201ENST00000624592 2127 ntBASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 SMTN-222ENST00000612341 3321 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 CDH1-212ENST00000611625 4878 ntTSL 5 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 SPTB-204ENST00000389722 10063 ntTSL 2 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 EPB41L1-212ENST00000441639 5967 ntTSL 5 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 CASP8AP2-205ENST00000551025 6151 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 ELMOD3-203ENST00000409013 2413 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 MICAL2-201ENST00000256194 3906 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 AIF1L-201ENST00000247291 3364 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 GDPD2-201ENST00000374382 2169 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 AP001046.1-201ENST00000435702 2816 ntTSL 2 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 RGS9-203ENST00000449996 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 PLK4-209ENST00000513090 3123 ntTSL 2 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 SLC45A3-201ENST00000367145 3341 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 AC133552.2-202ENST00000575694 574 ntBASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 DPY19L2P3-201ENST00000414296 2326 ntBASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 SLC8B1-213ENST00000552014 3289 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 TNS2-204ENST00000546602 4429 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 AC018645.3-201ENST00000628855 2646 ntBASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 PHLPP2-204ENST00000567016 4812 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 MPRIP-205ENST00000395811 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 SMAD9-201ENST00000350148 5447 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 OVOL1-201ENST00000335987 3034 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms