Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC21.54■■□□□ 1.04
CDC42BPBQ9Y5S2 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDC42BPBQ9Y5S2 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDC42BPBQ9Y5S2 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDC42BPBQ9Y5S2 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDC42BPBQ9Y5S2 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC21.54■■□□□ 1.04
CDC42BPBQ9Y5S2 DGAT2L7P-201ENST00000602462 744 ntBASIC21.54■■□□□ 1.04
CDC42BPBQ9Y5S2 MME-218ENST00000625667 363 ntTSL 5 BASIC21.54■■□□□ 1.04
CDC42BPBQ9Y5S2 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC21.54■■□□□ 1.04
CDC42BPBQ9Y5S2 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
CDC42BPBQ9Y5S2 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDC42BPBQ9Y5S2 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CDC42BPBQ9Y5S2 SHMT1P1-201ENST00000419974 1312 ntBASIC21.54■■□□□ 1.04
CDC42BPBQ9Y5S2 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDC42BPBQ9Y5S2 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDC42BPBQ9Y5S2 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDC42BPBQ9Y5S2 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDC42BPBQ9Y5S2 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CDC42BPBQ9Y5S2 AC011498.7-201ENST00000624986 2027 ntBASIC21.53■■□□□ 1.04
CDC42BPBQ9Y5S2 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC21.53■■□□□ 1.04
CDC42BPBQ9Y5S2 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDC42BPBQ9Y5S2 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CDC42BPBQ9Y5S2 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDC42BPBQ9Y5S2 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDC42BPBQ9Y5S2 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC21.53■■□□□ 1.04
CDC42BPBQ9Y5S2 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC21.53■■□□□ 1.04
CDC42BPBQ9Y5S2 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC21.53■■□□□ 1.04
CDC42BPBQ9Y5S2 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC21.53■■□□□ 1.04
CDC42BPBQ9Y5S2 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC21.53■■□□□ 1.04
CDC42BPBQ9Y5S2 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDC42BPBQ9Y5S2 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC21.53■■□□□ 1.04
CDC42BPBQ9Y5S2 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDC42BPBQ9Y5S2 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC21.53■■□□□ 1.04
CDC42BPBQ9Y5S2 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDC42BPBQ9Y5S2 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDC42BPBQ9Y5S2 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDC42BPBQ9Y5S2 AC015909.5-201ENST00000624336 2266 ntBASIC21.53■■□□□ 1.04
CDC42BPBQ9Y5S2 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDC42BPBQ9Y5S2 FKBP4P8-201ENST00000610931 1369 ntBASIC21.53■■□□□ 1.04
CDC42BPBQ9Y5S2 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDC42BPBQ9Y5S2 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42BPBQ9Y5S2 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42BPBQ9Y5S2 LINC00554-201ENST00000564841 3011 ntBASIC21.52■■□□□ 1.04
CDC42BPBQ9Y5S2 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CDC42BPBQ9Y5S2 AC103592.1-201ENST00000394513 664 ntBASIC21.52■■□□□ 1.04
CDC42BPBQ9Y5S2 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CDC42BPBQ9Y5S2 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CDC42BPBQ9Y5S2 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC21.52■■□□□ 1.04
CDC42BPBQ9Y5S2 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC21.52■■□□□ 1.04
CDC42BPBQ9Y5S2 AC090136.2-201ENST00000517809 420 ntBASIC21.52■■□□□ 1.04
CDC42BPBQ9Y5S2 MIR5001-201ENST00000580185 100 ntBASIC21.52■■□□□ 1.04
CDC42BPBQ9Y5S2 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC21.52■■□□□ 1.04
CDC42BPBQ9Y5S2 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42BPBQ9Y5S2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42BPBQ9Y5S2 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42BPBQ9Y5S2 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42BPBQ9Y5S2 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42BPBQ9Y5S2 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42BPBQ9Y5S2 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42BPBQ9Y5S2 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42BPBQ9Y5S2 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CDC42BPBQ9Y5S2 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC21.52■■□□□ 1.03
CDC42BPBQ9Y5S2 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CDC42BPBQ9Y5S2 OR51A9P-201ENST00000422578 911 ntBASIC21.52■■□□□ 1.03
CDC42BPBQ9Y5S2 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC21.52■■□□□ 1.03
CDC42BPBQ9Y5S2 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC21.52■■□□□ 1.03
CDC42BPBQ9Y5S2 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC21.52■■□□□ 1.03
CDC42BPBQ9Y5S2 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC21.52■■□□□ 1.03
CDC42BPBQ9Y5S2 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC21.51■■□□□ 1.03
CDC42BPBQ9Y5S2 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42BPBQ9Y5S2 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC21.51■■□□□ 1.03
CDC42BPBQ9Y5S2 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42BPBQ9Y5S2 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42BPBQ9Y5S2 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42BPBQ9Y5S2 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42BPBQ9Y5S2 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42BPBQ9Y5S2 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CDC42BPBQ9Y5S2 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42BPBQ9Y5S2 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42BPBQ9Y5S2 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CDC42BPBQ9Y5S2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42BPBQ9Y5S2 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42BPBQ9Y5S2 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42BPBQ9Y5S2 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42BPBQ9Y5S2 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42BPBQ9Y5S2 UROS-201ENST00000368774 744 ntTSL 2 BASIC21.51■■□□□ 1.03
CDC42BPBQ9Y5S2 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42BPBQ9Y5S2 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC21.51■■□□□ 1.03
CDC42BPBQ9Y5S2 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC21.51■■□□□ 1.03
CDC42BPBQ9Y5S2 KRT18P62-201ENST00000446618 1287 ntBASIC21.51■■□□□ 1.03
CDC42BPBQ9Y5S2 RN7SL375P-201ENST00000492442 298 ntBASIC21.51■■□□□ 1.03
CDC42BPBQ9Y5S2 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC21.51■■□□□ 1.03
CDC42BPBQ9Y5S2 AC093300.1-201ENST00000510368 1201 ntBASIC21.51■■□□□ 1.03
CDC42BPBQ9Y5S2 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CDC42BPBQ9Y5S2 CES1P2-201ENST00000566467 1242 ntBASIC21.51■■□□□ 1.03
CDC42BPBQ9Y5S2 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
CDC42BPBQ9Y5S2 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CDC42BPBQ9Y5S2 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42BPBQ9Y5S2 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CDC42BPBQ9Y5S2 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms