Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 AC005912.2-201ENST00000619492 2400 ntBASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHB1Q9Y5F3 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 EIF4HP1-201ENST00000453115 687 ntBASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHB1Q9Y5F3 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 AC007191.1-201ENST00000623179 2995 ntBASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 CLUHP2-201ENST00000426660 1303 ntBASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 AL354989.2-201ENST00000435838 1540 ntBASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 FTLP10-202ENST00000505798 471 ntBASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 AC022447.6-201ENST00000515522 438 ntBASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 AC131206.1-201ENST00000538078 1211 ntBASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 AC138696.2-201ENST00000607376 223 ntBASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 AC138466.3-201ENST00000619983 221 ntBASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 AC092135.3-201ENST00000624151 1846 ntBASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PCDHB1Q9Y5F3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHB1Q9Y5F3 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms