Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC17.06■□□□□ 0.32
CTDP1Q9Y5B0 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.06■□□□□ 0.32
CTDP1Q9Y5B0 SCARNA21-201ENST00000517026 139 ntBASIC17.06■□□□□ 0.32
CTDP1Q9Y5B0 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.06■□□□□ 0.32
CTDP1Q9Y5B0 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.06■□□□□ 0.32
CTDP1Q9Y5B0 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.06■□□□□ 0.32
CTDP1Q9Y5B0 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC17.06■□□□□ 0.32
CTDP1Q9Y5B0 AC131206.1-201ENST00000538078 1211 ntBASIC17.06■□□□□ 0.32
CTDP1Q9Y5B0 AL161670.2-201ENST00000557650 1227 ntBASIC17.06■□□□□ 0.32
CTDP1Q9Y5B0 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.06■□□□□ 0.32
CTDP1Q9Y5B0 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CTDP1Q9Y5B0 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.06■□□□□ 0.32
CTDP1Q9Y5B0 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTDP1Q9Y5B0 DKFZP434A062-201ENST00000573103 5021 ntBASIC17.06■□□□□ 0.32
CTDP1Q9Y5B0 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
CTDP1Q9Y5B0 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTDP1Q9Y5B0 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.06■□□□□ 0.32
CTDP1Q9Y5B0 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTDP1Q9Y5B0 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTDP1Q9Y5B0 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTDP1Q9Y5B0 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.06■□□□□ 0.32
CTDP1Q9Y5B0 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTDP1Q9Y5B0 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 HLA-J-204ENST00000495278 958 ntBASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 AL160314.3-201ENST00000556041 767 ntBASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 AP000346.4-201ENST00000614827 381 ntBASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 AC007292.2-201ENST00000593524 1812 ntBASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTDP1Q9Y5B0 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 CICP6-201ENST00000457191 2729 ntBASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 AC007274.2-201ENST00000421675 662 ntBASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 AC009779.1-201ENST00000551138 283 ntBASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 RBM8B-201ENST00000555532 525 ntBASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 CHMP4BP1-201ENST00000556017 588 ntBASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
CTDP1Q9Y5B0 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms