Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
LINC00588Q9Y4M8 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC00588Q9Y4M8 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 AC018442.1-201ENST00000421439 2061 ntBASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 TUBBP5-203ENST00000508529 1334 ntBASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 AL157407.1-201ENST00000435784 904 ntBASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 VDAC1P1-201ENST00000439229 848 ntBASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 RN7SL11P-201ENST00000471305 293 ntBASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 MARK2P5-201ENST00000507649 634 ntBASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 SCARNA21-201ENST00000517026 139 ntBASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 AC104640.1-201ENST00000562617 2109 ntBASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 SNORD3B-2-202ENST00000571722 791 ntBASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 KLK3-207ENST00000595952 969 ntTSL 3 BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 AL645939.5-201ENST00000606834 243 ntBASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 AL021578.1-201ENST00000613646 709 ntBASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 AC100757.4-201ENST00000626934 759 ntBASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 AL805961.1-203ENST00000641078 1258 ntBASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 POR-201ENST00000394893 2532 ntTSL 5 BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC10.11□□□□□ -0.79
LINC00588Q9Y4M8 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00588Q9Y4M8 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
LINC00588Q9Y4M8 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00588Q9Y4M8 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00588Q9Y4M8 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00588Q9Y4M8 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00588Q9Y4M8 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00588Q9Y4M8 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
LINC00588Q9Y4M8 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00588Q9Y4M8 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00588Q9Y4M8 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00588Q9Y4M8 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00588Q9Y4M8 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC10.1□□□□□ -0.79
LINC00588Q9Y4M8 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00588Q9Y4M8 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
LINC00588Q9Y4M8 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00588Q9Y4M8 AC136759.1-202ENST00000530858 2194 ntBASIC10.1□□□□□ -0.79
LINC00588Q9Y4M8 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00588Q9Y4M8 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00588Q9Y4M8 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00588Q9Y4M8 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC10.1□□□□□ -0.79
LINC00588Q9Y4M8 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC10.1□□□□□ -0.79
LINC00588Q9Y4M8 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
LINC00588Q9Y4M8 AL662890.1-201ENST00000396818 632 ntBASIC10.1□□□□□ -0.79
LINC00588Q9Y4M8 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC10.1□□□□□ -0.79
LINC00588Q9Y4M8 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00588Q9Y4M8 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00588Q9Y4M8 HNRNPA1P27-201ENST00000412087 955 ntBASIC10.1□□□□□ -0.79
LINC00588Q9Y4M8 SLC16A6P1-201ENST00000413214 1059 ntBASIC10.1□□□□□ -0.79
LINC00588Q9Y4M8 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC10.1□□□□□ -0.79
LINC00588Q9Y4M8 PTPA-215ENST00000432124 567 ntTSL 4 BASIC10.1□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms