Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 ELK1P1-201ENST00000485699 580 ntBASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 MIR4745-201ENST00000577608 62 ntBASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RHBDD3Q9Y3P4 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 RNU1-114P-201ENST00000365297 166 ntBASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 CTBP2P3-201ENST00000585629 1255 ntBASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.01□□□□□ -0.33
RHBDD3Q9Y3P4 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
RHBDD3Q9Y3P4 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13□□□□□ -0.33
RHBDD3Q9Y3P4 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms