Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 FTLP10-202ENST00000505798 471 ntBASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 MTND1P8-201ENST00000571424 950 ntBASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 AL357094.1-201ENST00000603845 844 ntBASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 AC138696.2-201ENST00000607376 223 ntBASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS9D1Q9Y2B5 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 CRYGB-201ENST00000260988 641 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 TPM3P8-201ENST00000330554 643 ntBASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 LINC02349-201ENST00000561386 963 ntTSL 2 BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 AC138761.1-201ENST00000584393 385 ntBASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 PSMG2-210ENST00000590217 1036 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 AC138466.3-201ENST00000619983 221 ntBASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 AC025048.6-201ENST00000634326 1161 ntBASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VPS9D1Q9Y2B5 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 AL138709.1-201ENST00000614840 1693 ntBASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms