Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 AC006158.1-201ENST00000610661 249 ntBASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 HPX-213ENST00000615166 826 ntTSL 5 BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 AC007952.5-201ENST00000572818 1486 ntBASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SHANK2Q9UPX8 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SHANK2Q9UPX8 MPI-203ENST00000535694 1523 ntTSL 2 BASIC21.33■■□□□ 1.01
SHANK2Q9UPX8 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
SHANK2Q9UPX8 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SHANK2Q9UPX8 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SHANK2Q9UPX8 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
SHANK2Q9UPX8 RN7SL23P-201ENST00000484055 275 ntBASIC21.33■■□□□ 1.01
SHANK2Q9UPX8 CHCHD2P2-201ENST00000503744 321 ntBASIC21.33■■□□□ 1.01
SHANK2Q9UPX8 AL512310.5-201ENST00000551999 515 ntBASIC21.33■■□□□ 1.01
SHANK2Q9UPX8 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC21.33■■□□□ 1.01
SHANK2Q9UPX8 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC21.33■■□□□ 1.01
SHANK2Q9UPX8 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SHANK2Q9UPX8 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SHANK2Q9UPX8 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SHANK2Q9UPX8 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
SHANK2Q9UPX8 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SHANK2Q9UPX8 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
SHANK2Q9UPX8 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SHANK2Q9UPX8 AC232323.1-201ENST00000540724 2099 ntBASIC21.33■■□□□ 1.01
SHANK2Q9UPX8 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SHANK2Q9UPX8 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SHANK2Q9UPX8 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SHANK2Q9UPX8 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SHANK2Q9UPX8 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC21.33■■□□□ 1
SHANK2Q9UPX8 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SHANK2Q9UPX8 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
SHANK2Q9UPX8 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC21.33■■□□□ 1
SHANK2Q9UPX8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SHANK2Q9UPX8 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SHANK2Q9UPX8 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
SHANK2Q9UPX8 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC21.33■■□□□ 1
SHANK2Q9UPX8 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
SHANK2Q9UPX8 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC21.33■■□□□ 1
SHANK2Q9UPX8 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
SHANK2Q9UPX8 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
SHANK2Q9UPX8 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC21.33■■□□□ 1
SHANK2Q9UPX8 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC21.33■■□□□ 1
SHANK2Q9UPX8 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC21.33■■□□□ 1
SHANK2Q9UPX8 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SHANK2Q9UPX8 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC21.32■■□□□ 1
SHANK2Q9UPX8 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SHANK2Q9UPX8 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC21.32■■□□□ 1
SHANK2Q9UPX8 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC21.32■■□□□ 1
SHANK2Q9UPX8 EEF1DP2-201ENST00000433698 843 ntBASIC21.32■■□□□ 1
SHANK2Q9UPX8 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC21.32■■□□□ 1
SHANK2Q9UPX8 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC21.32■■□□□ 1
SHANK2Q9UPX8 PPIA-208ENST00000489459 907 ntTSL 2 BASIC21.32■■□□□ 1
SHANK2Q9UPX8 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC21.32■■□□□ 1
SHANK2Q9UPX8 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC21.32■■□□□ 1
SHANK2Q9UPX8 AC027139.1-201ENST00000565286 951 ntBASIC21.32■■□□□ 1
SHANK2Q9UPX8 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC21.32■■□□□ 1
SHANK2Q9UPX8 AP005264.5-201ENST00000590066 467 ntBASIC21.32■■□□□ 1
SHANK2Q9UPX8 PPIA-210ENST00000620047 827 ntTSL 5 BASIC21.32■■□□□ 1
SHANK2Q9UPX8 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SHANK2Q9UPX8 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SHANK2Q9UPX8 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
SHANK2Q9UPX8 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC21.32■■□□□ 1
SHANK2Q9UPX8 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SHANK2Q9UPX8 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SHANK2Q9UPX8 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
SHANK2Q9UPX8 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC21.32■■□□□ 1
SHANK2Q9UPX8 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SHANK2Q9UPX8 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
SHANK2Q9UPX8 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SHANK2Q9UPX8 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SHANK2Q9UPX8 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
SHANK2Q9UPX8 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms