Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 AL160314.3-201ENST00000556041 767 ntBASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 SNORD3B-2-202ENST00000571722 791 ntBASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 NDUFV2P1-201ENST00000596415 907 ntBASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 MVK-217ENST00000639206 367 ntTSL 5 BASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 AC023908.3-201ENST00000564211 3047 ntBASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
HMG20BQ9P0W2 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 AC136759.1-202ENST00000530858 2194 ntBASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 CYP46A4P-201ENST00000414953 267 ntBASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 SPTLC1P5-201ENST00000450718 252 ntBASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 AC106794.1-201ENST00000506935 792 ntBASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 SCARNA21-201ENST00000517026 139 ntBASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 AC007686.3-201ENST00000619017 3487 ntBASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 FAM90A7P-201ENST00000382628 1395 ntBASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 FAM90A23P-201ENST00000400136 1395 ntBASIC17.91■□□□□ 0.46
HMG20BQ9P0W2 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 AL035414.1-201ENST00000451327 857 ntBASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 TPT1P11-201ENST00000458482 498 ntBASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 MARK2P5-201ENST00000507649 634 ntBASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 AC103988.2-201ENST00000561804 725 ntBASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 AL606495.2-201ENST00000605867 535 ntBASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
HMG20BQ9P0W2 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms