Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
KIAA1549Q9HCM3 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.03□□□□□ -0.32
KIAA1549Q9HCM3 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
KIAA1549Q9HCM3 AL022334.2-201ENST00000610000 484 ntBASIC13.03□□□□□ -0.32
KIAA1549Q9HCM3 AC007718.1-201ENST00000621078 280 ntBASIC13.03□□□□□ -0.32
KIAA1549Q9HCM3 YRDCP1-201ENST00000621419 643 ntBASIC13.03□□□□□ -0.32
KIAA1549Q9HCM3 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.03□□□□□ -0.32
KIAA1549Q9HCM3 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
KIAA1549Q9HCM3 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
KIAA1549Q9HCM3 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
KIAA1549Q9HCM3 CAP2P1-201ENST00000557743 1390 ntBASIC13.03□□□□□ -0.32
KIAA1549Q9HCM3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
KIAA1549Q9HCM3 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.02□□□□□ -0.32
KIAA1549Q9HCM3 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
KIAA1549Q9HCM3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
KIAA1549Q9HCM3 AC011498.7-201ENST00000624986 2027 ntBASIC13.02□□□□□ -0.32
KIAA1549Q9HCM3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
KIAA1549Q9HCM3 LINC02228-204ENST00000642115 2962 ntBASIC13.02□□□□□ -0.32
KIAA1549Q9HCM3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
KIAA1549Q9HCM3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.02□□□□□ -0.32
KIAA1549Q9HCM3 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
KIAA1549Q9HCM3 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.02□□□□□ -0.32
KIAA1549Q9HCM3 RNA5SP359-201ENST00000364838 113 ntBASIC13.02□□□□□ -0.32
KIAA1549Q9HCM3 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
KIAA1549Q9HCM3 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.02□□□□□ -0.32
KIAA1549Q9HCM3 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.32
KIAA1549Q9HCM3 AC078875.1-201ENST00000431907 724 ntBASIC13.02□□□□□ -0.32
KIAA1549Q9HCM3 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC13.02□□□□□ -0.32
KIAA1549Q9HCM3 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.02□□□□□ -0.32
KIAA1549Q9HCM3 IGLV3-15-201ENST00000518356 244 ntBASIC13.02□□□□□ -0.32
KIAA1549Q9HCM3 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.02□□□□□ -0.32
KIAA1549Q9HCM3 FOS-206ENST00000555347 1280 ntTSL 2 BASIC13.02□□□□□ -0.32
KIAA1549Q9HCM3 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.02□□□□□ -0.32
KIAA1549Q9HCM3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KIAA1549Q9HCM3 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KIAA1549Q9HCM3 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KIAA1549Q9HCM3 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
KIAA1549Q9HCM3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.02□□□□□ -0.33
KIAA1549Q9HCM3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
KIAA1549Q9HCM3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KIAA1549Q9HCM3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KIAA1549Q9HCM3 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
KIAA1549Q9HCM3 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
KIAA1549Q9HCM3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KIAA1549Q9HCM3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
KIAA1549Q9HCM3 AC009093.10-201ENST00000641956 1442 ntBASIC13.02□□□□□ -0.33
KIAA1549Q9HCM3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
KIAA1549Q9HCM3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
KIAA1549Q9HCM3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
KIAA1549Q9HCM3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
KIAA1549Q9HCM3 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.02□□□□□ -0.33
KIAA1549Q9HCM3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.02□□□□□ -0.33
KIAA1549Q9HCM3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.02□□□□□ -0.33
KIAA1549Q9HCM3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
KIAA1549Q9HCM3 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
KIAA1549Q9HCM3 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KIAA1549Q9HCM3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
KIAA1549Q9HCM3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KIAA1549Q9HCM3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KIAA1549Q9HCM3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
KIAA1549Q9HCM3 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
KIAA1549Q9HCM3 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 AL353637.1-201ENST00000451571 732 ntBASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 AC234782.1-201ENST00000451950 919 ntBASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 RPS2P36-201ENST00000456516 831 ntBASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 AL161670.2-201ENST00000557650 1227 ntBASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 AC100757.4-201ENST00000626934 759 ntBASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 AC012617.1-204ENST00000586340 2305 ntBASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 AC020910.6-201ENST00000623084 1459 ntBASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KIAA1549Q9HCM3 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms