Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 AC016694.1-201ENST00000434179 700 ntBASIC14.13□□□□□ -0.15
BRF2Q9HAW0 TTTY23B-201ENST00000442790 549 ntBASIC14.13□□□□□ -0.15
BRF2Q9HAW0 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 BCRP2-202ENST00000447763 634 ntBASIC14.13□□□□□ -0.15
BRF2Q9HAW0 INE1-201ENST00000456273 945 ntBASIC14.13□□□□□ -0.15
BRF2Q9HAW0 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 BCRP6-201ENST00000510112 632 ntBASIC14.13□□□□□ -0.15
BRF2Q9HAW0 BCRP7-201ENST00000511549 544 ntBASIC14.13□□□□□ -0.15
BRF2Q9HAW0 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 BTNL10-201ENST00000595971 695 ntBASIC14.13□□□□□ -0.15
BRF2Q9HAW0 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 AC006453.4-201ENST00000636949 1252 ntBASIC14.13□□□□□ -0.15
BRF2Q9HAW0 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 BEND3P1-201ENST00000421591 1944 ntBASIC14.13□□□□□ -0.15
BRF2Q9HAW0 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.13□□□□□ -0.15
BRF2Q9HAW0 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 ARSEP1-201ENST00000420443 635 ntBASIC14.12□□□□□ -0.15
BRF2Q9HAW0 CNN2P8-201ENST00000421872 913 ntBASIC14.12□□□□□ -0.15
BRF2Q9HAW0 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 FTH1P14-201ENST00000482930 551 ntBASIC14.12□□□□□ -0.15
BRF2Q9HAW0 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 OR10B1P-201ENST00000601666 907 ntBASIC14.12□□□□□ -0.15
BRF2Q9HAW0 AC008825.2-201ENST00000603374 718 ntBASIC14.12□□□□□ -0.15
BRF2Q9HAW0 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 AC002472.3-201ENST00000640124 621 ntBASIC14.12□□□□□ -0.15
BRF2Q9HAW0 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms