Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF3BQ9BZI7 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF3BQ9BZI7 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF3BQ9BZI7 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF3BQ9BZI7 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
UPF3BQ9BZI7 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF3BQ9BZI7 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF3BQ9BZI7 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF3BQ9BZI7 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF3BQ9BZI7 AC098614.1-201ENST00000368528 745 ntBASIC17.68■□□□□ 0.42
UPF3BQ9BZI7 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF3BQ9BZI7 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
UPF3BQ9BZI7 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.68■□□□□ 0.42
UPF3BQ9BZI7 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.68■□□□□ 0.42
UPF3BQ9BZI7 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.68■□□□□ 0.42
UPF3BQ9BZI7 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.68■□□□□ 0.42
UPF3BQ9BZI7 AC009486.1-201ENST00000569860 813 ntBASIC17.68■□□□□ 0.42
UPF3BQ9BZI7 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
UPF3BQ9BZI7 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.68■□□□□ 0.42
UPF3BQ9BZI7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
UPF3BQ9BZI7 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF3BQ9BZI7 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF3BQ9BZI7 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF3BQ9BZI7 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF3BQ9BZI7 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF3BQ9BZI7 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF3BQ9BZI7 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF3BQ9BZI7 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
UPF3BQ9BZI7 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF3BQ9BZI7 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF3BQ9BZI7 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 POM121L8P-201ENST00000417732 1281 ntBASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 POM121L9P-203ENST00000441984 1285 ntBASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 MIR5189-201ENST00000577370 114 ntBASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 AC016397.2-201ENST00000624848 1985 ntBASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 AC090505.1-201ENST00000430515 1834 ntBASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 AC011498.7-201ENST00000624986 2027 ntBASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 AC134312.5-201ENST00000568031 1313 ntBASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPF3BQ9BZI7 OS9-207ENST00000439210 1946 ntTSL 2 BASIC17.66■□□□□ 0.42
UPF3BQ9BZI7 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPF3BQ9BZI7 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UPF3BQ9BZI7 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UPF3BQ9BZI7 RN7SL832P-201ENST00000607781 1756 ntBASIC17.66■□□□□ 0.42
UPF3BQ9BZI7 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UPF3BQ9BZI7 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17.66■□□□□ 0.42
UPF3BQ9BZI7 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
UPF3BQ9BZI7 AC015688.4-201ENST00000580780 1647 ntBASIC17.66■□□□□ 0.42
UPF3BQ9BZI7 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
UPF3BQ9BZI7 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPF3BQ9BZI7 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
UPF3BQ9BZI7 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPF3BQ9BZI7 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.66■□□□□ 0.42
UPF3BQ9BZI7 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UPF3BQ9BZI7 AC012441.1-201ENST00000446669 685 ntBASIC17.66■□□□□ 0.42
UPF3BQ9BZI7 AC106760.1-201ENST00000508690 800 ntBASIC17.66■□□□□ 0.42
UPF3BQ9BZI7 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.66■□□□□ 0.42
UPF3BQ9BZI7 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UPF3BQ9BZI7 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.66■□□□□ 0.42
UPF3BQ9BZI7 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.66■□□□□ 0.42
UPF3BQ9BZI7 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.66■□□□□ 0.42
UPF3BQ9BZI7 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.66■□□□□ 0.42
UPF3BQ9BZI7 AC138696.2-201ENST00000607376 223 ntBASIC17.66■□□□□ 0.42
UPF3BQ9BZI7 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UPF3BQ9BZI7 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.66■□□□□ 0.42
UPF3BQ9BZI7 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPF3BQ9BZI7 AL138709.1-201ENST00000614840 1693 ntBASIC17.66■□□□□ 0.42
UPF3BQ9BZI7 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC17.66■□□□□ 0.42
UPF3BQ9BZI7 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPF3BQ9BZI7 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.66■□□□□ 0.42
UPF3BQ9BZI7 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms