Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 SMG6-201ENST00000263073 5960 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 ALK-205ENST00000618119 4646 ntTSL 5 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 OTOG-202ENST00000399391 8778 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 MADD-209ENST00000406482 5614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 GRIPAP1-201ENST00000376423 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 REXO1L4P-201ENST00000605109 1937 ntBASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 RPS2P28-201ENST00000314255 741 ntBASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 LINC00685-201ENST00000391707 428 ntTSL 5 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 PGGT1BP2-201ENST00000398621 1028 ntBASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 PCED1CP-201ENST00000419887 785 ntBASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 AL392088.1-201ENST00000428364 670 ntBASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 AC140658.5-201ENST00000438532 169 ntBASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 EEF1DP4-201ENST00000446006 880 ntBASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 FOSL1P1-201ENST00000511041 816 ntBASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 AC105233.2-201ENST00000523697 349 ntBASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 AF228730.5-201ENST00000530288 346 ntBASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 AC105339.3-201ENST00000560043 636 ntBASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 MIR4751-201ENST00000578027 74 ntBASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
LCE3DQ9BYE3 CYGB-205ENST00000590175 830 ntTSL 3 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms