Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 RTN3P1-201ENST00000536295 711 ntBASIC14.56□□□□□ -0.08
HDAC8Q9BY41 SORD2P-201ENST00000558556 1069 ntBASIC14.56□□□□□ -0.08
HDAC8Q9BY41 AC005586.2-201ENST00000563946 837 ntBASIC14.56□□□□□ -0.08
HDAC8Q9BY41 MIR3907-201ENST00000579424 151 ntBASIC14.56□□□□□ -0.08
HDAC8Q9BY41 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 MIR6074-201ENST00000612054 107 ntBASIC14.56□□□□□ -0.08
HDAC8Q9BY41 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.56□□□□□ -0.08
HDAC8Q9BY41 LINC01165-201ENST00000445190 1623 ntBASIC14.55□□□□□ -0.08
HDAC8Q9BY41 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 AC023824.1-201ENST00000562945 2975 ntBASIC14.55□□□□□ -0.08
HDAC8Q9BY41 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 PKD1P5-201ENST00000532415 10291 ntBASIC14.55□□□□□ -0.08
HDAC8Q9BY41 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 ELK2AP-201ENST00000392510 1007 ntBASIC14.55□□□□□ -0.08
HDAC8Q9BY41 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 MAGEA5-201ENST00000446757 942 ntBASIC14.55□□□□□ -0.08
HDAC8Q9BY41 AC234782.1-201ENST00000451950 919 ntBASIC14.55□□□□□ -0.08
HDAC8Q9BY41 AC116345.2-201ENST00000512837 523 ntBASIC14.55□□□□□ -0.08
HDAC8Q9BY41 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 AC079328.1-201ENST00000560358 952 ntBASIC14.55□□□□□ -0.08
HDAC8Q9BY41 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 MIR6769A-201ENST00000617340 73 ntBASIC14.55□□□□□ -0.08
HDAC8Q9BY41 AC006453.1-201ENST00000636037 1257 ntBASIC14.55□□□□□ -0.08
HDAC8Q9BY41 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 MTHFR-210ENST00000641407 2387 ntBASIC14.55□□□□□ -0.08
HDAC8Q9BY41 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HDAC8Q9BY41 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HDAC8Q9BY41 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.54□□□□□ -0.08
HDAC8Q9BY41 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HDAC8Q9BY41 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.54□□□□□ -0.08
HDAC8Q9BY41 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
HDAC8Q9BY41 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HDAC8Q9BY41 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
HDAC8Q9BY41 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.54□□□□□ -0.08
HDAC8Q9BY41 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HDAC8Q9BY41 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
HDAC8Q9BY41 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms