Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP3Q9BWW4 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
SSBP3Q9BWW4 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
SSBP3Q9BWW4 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
SSBP3Q9BWW4 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SSBP3Q9BWW4 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC12.4□□□□□ -0.43
SSBP3Q9BWW4 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SSBP3Q9BWW4 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.4□□□□□ -0.43
SSBP3Q9BWW4 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 TCAF2P1-201ENST00000291129 2421 ntBASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 ZBED1P1-201ENST00000502364 1930 ntBASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 SALL4P5-201ENST00000419001 1760 ntBASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 AC104306.2-201ENST00000451877 341 ntBASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 ATP6V0CP2-201ENST00000469409 207 ntBASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 AC104982.3-201ENST00000581995 514 ntBASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 AL118558.3-201ENST00000607414 1079 ntBASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 AC005695.3-201ENST00000614522 232 ntBASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SSBP3Q9BWW4 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 CHMP1AP1-201ENST00000445563 662 ntBASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 HSPB1P2-201ENST00000448722 546 ntBASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 AL591846.1-201ENST00000451736 433 ntBASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 APOA2-204ENST00000464492 530 ntTSL 3 BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 NAT9-222ENST00000583476 583 ntTSL 3 BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
SSBP3Q9BWW4 AL096828.3-201ENST00000615354 462 ntBASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms