Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 MTX1P1-201ENST00000440904 838 ntBASIC12.27□□□□□ -0.45
GAFA1Q96PS6 Z93015.1-201ENST00000451718 390 ntBASIC12.27□□□□□ -0.45
GAFA1Q96PS6 RPL13AP20-201ENST00000459725 609 ntBASIC12.27□□□□□ -0.45
GAFA1Q96PS6 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 DUX4L46-201ENST00000566845 751 ntBASIC12.27□□□□□ -0.45
GAFA1Q96PS6 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 AC132192.2-201ENST00000596206 1147 ntBASIC12.27□□□□□ -0.45
GAFA1Q96PS6 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 AC023908.3-201ENST00000564211 3047 ntBASIC12.27□□□□□ -0.45
GAFA1Q96PS6 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
GAFA1Q96PS6 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 AC215219.1-201ENST00000400706 1817 ntBASIC12.26□□□□□ -0.45
GAFA1Q96PS6 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.26□□□□□ -0.45
GAFA1Q96PS6 RPS2P32-201ENST00000439199 892 ntBASIC12.26□□□□□ -0.45
GAFA1Q96PS6 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 FAM86HP-204ENST00000513466 959 ntBASIC12.26□□□□□ -0.45
GAFA1Q96PS6 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 AL583810.1-201ENST00000553344 1045 ntBASIC12.26□□□□□ -0.45
GAFA1Q96PS6 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 MIR4783-201ENST00000580343 82 ntBASIC12.26□□□□□ -0.45
GAFA1Q96PS6 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 AC009955.4-201ENST00000597192 544 ntBASIC12.26□□□□□ -0.45
GAFA1Q96PS6 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 AC009093.10-201ENST00000641956 1442 ntBASIC12.26□□□□□ -0.45
GAFA1Q96PS6 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.26□□□□□ -0.45
GAFA1Q96PS6 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms