Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.05□□□□□ -0.16
COL21A1Q96P44 AC068587.3-201ENST00000526613 355 ntBASIC14.05□□□□□ -0.16
COL21A1Q96P44 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL21A1Q96P44 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.05□□□□□ -0.16
COL21A1Q96P44 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.05□□□□□ -0.16
COL21A1Q96P44 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.05□□□□□ -0.16
COL21A1Q96P44 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL21A1Q96P44 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.05□□□□□ -0.16
COL21A1Q96P44 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
COL21A1Q96P44 RPSAP52-203ENST00000622976 1023 ntBASIC14.05□□□□□ -0.16
COL21A1Q96P44 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL21A1Q96P44 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL21A1Q96P44 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL21A1Q96P44 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL21A1Q96P44 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.05□□□□□ -0.16
COL21A1Q96P44 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
COL21A1Q96P44 AC134312.5-201ENST00000568031 1313 ntBASIC14.05□□□□□ -0.16
COL21A1Q96P44 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
COL21A1Q96P44 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL21A1Q96P44 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL21A1Q96P44 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.05□□□□□ -0.16
COL21A1Q96P44 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.05□□□□□ -0.16
COL21A1Q96P44 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
COL21A1Q96P44 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.05□□□□□ -0.16
COL21A1Q96P44 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL21A1Q96P44 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
COL21A1Q96P44 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL21A1Q96P44 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COL21A1Q96P44 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
COL21A1Q96P44 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL21A1Q96P44 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
COL21A1Q96P44 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.04□□□□□ -0.16
COL21A1Q96P44 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL21A1Q96P44 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COL21A1Q96P44 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL21A1Q96P44 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL21A1Q96P44 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL21A1Q96P44 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.04□□□□□ -0.16
COL21A1Q96P44 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.04□□□□□ -0.16
COL21A1Q96P44 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
COL21A1Q96P44 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL21A1Q96P44 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
COL21A1Q96P44 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL21A1Q96P44 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
COL21A1Q96P44 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COL21A1Q96P44 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
COL21A1Q96P44 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
COL21A1Q96P44 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
COL21A1Q96P44 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
COL21A1Q96P44 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
COL21A1Q96P44 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.04□□□□□ -0.16
COL21A1Q96P44 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.04□□□□□ -0.16
COL21A1Q96P44 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.04□□□□□ -0.16
COL21A1Q96P44 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
COL21A1Q96P44 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.04□□□□□ -0.16
COL21A1Q96P44 AC012441.1-201ENST00000446669 685 ntBASIC14.04□□□□□ -0.16
COL21A1Q96P44 GIMAP3P-201ENST00000495150 836 ntBASIC14.04□□□□□ -0.16
COL21A1Q96P44 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COL21A1Q96P44 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COL21A1Q96P44 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
COL21A1Q96P44 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.04□□□□□ -0.16
COL21A1Q96P44 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COL21A1Q96P44 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COL21A1Q96P44 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.04□□□□□ -0.16
COL21A1Q96P44 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL21A1Q96P44 KRT8P14-201ENST00000414254 1442 ntBASIC14.04□□□□□ -0.16
COL21A1Q96P44 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL21A1Q96P44 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.04□□□□□ -0.16
COL21A1Q96P44 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL21A1Q96P44 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.04□□□□□ -0.16
COL21A1Q96P44 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL21A1Q96P44 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.04□□□□□ -0.16
COL21A1Q96P44 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL21A1Q96P44 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
COL21A1Q96P44 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.04□□□□□ -0.16
COL21A1Q96P44 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.04□□□□□ -0.16
COL21A1Q96P44 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL21A1Q96P44 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL21A1Q96P44 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.04□□□□□ -0.16
COL21A1Q96P44 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
COL21A1Q96P44 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
COL21A1Q96P44 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL21A1Q96P44 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COL21A1Q96P44 AL359183.1-201ENST00000623796 2132 ntBASIC14.03□□□□□ -0.16
COL21A1Q96P44 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
COL21A1Q96P44 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL21A1Q96P44 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
COL21A1Q96P44 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL21A1Q96P44 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL21A1Q96P44 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COL21A1Q96P44 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL21A1Q96P44 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COL21A1Q96P44 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL21A1Q96P44 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
COL21A1Q96P44 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL21A1Q96P44 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
COL21A1Q96P44 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
COL21A1Q96P44 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL21A1Q96P44 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COL21A1Q96P44 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms